G27490


Basic Information

Item Value
gene id G27490
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9587319 ~ 9590318 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40736
tcacatgtatttttttattgtagtatttttataaacttgaTTACATTATCCGTTAACAAAATAATTGATATTACATAGGctagaaacattttacatttgtgcaATTTCATAATATATCGTTTAAATGCGATTTAAAAACcattcaataataatatttaaattaaatgacaacACGCCTGCTTGTCTAACTAAATTGTCAAATTACATTTCTAggcaatcattttaaatgatccgTCCGTCTCCGACCTTTCACCAACTACATTTGTCTGCCATTAAATAACATCCGTCTAATCTTGTGGCACGTAGGCTGCATAACAGGTCTGTGTGTTTATTCTGAATGAACTGTAAAGTGAATCATGTTGCTAAATGAGGGTGTATTCAGAAGTGATGTAAGGTCTGTAATCACAGGTCAGACCACAGACGGCATCTGAACATATCATCAATGGATAAAGCACTGGACTACATGTATAACAAGGCCGTCTGCAGAAAAGCATATCACTGAAACCCACCCATTAAGTTTGTGAGAAGTGAAAGAAGCCGGTCACCCTgttccttttccttttcctttacGCACCAAACCCCAGATTGGATTCTTCTCCATCACCCGATTCGGTCTTAAAGCGATACCGACACCTTTGCAGCAAACGTGCCGCCGTGGCAGAGACTGACTTGAACGGTTtcgttgggtttttttttatttgactgacAGAAAACGCTGAAACAATACACAAAACATTCAAGTGGCAAAACTGGCTTCTTGGGAGCCCTTGCATGGCAATCCAATTTATTAAACTACAGATGCTCGGTTATACAAAATTGCACCACTTTTAATTAAGGCTTTTAAGTTGACACATGGCCACCACCCCCCCACCCACCTCCGACCCATCAGAAGCGGACGATGTTGCGTTTTAAAATACTGTGCCTCCGTCTCAGTCCTGGTCCTCACGTCAAGTTTCTATTTTCTTTAGTTCCCCCTTCCCCCTCCAATCCTAAAAAGCATCAAGGCATTTGCTTGCAGAAGGATAACGCGACTCTTTGTGGTCGGCCGCTGCTCGGACGCTCCCTGGGAGTCGCGTTCTTCACTTTACACAGTGCAAATCCTCAAAGCATTCATAAACAATTCATCACGCGTACATACGGCATGCTGCACCCCGCAAAGAGGCGTTTCGATGTCCGACAAGACCGGTATCGAACGCTACAACTGCGCATTCGGCTCTTTTTTACGAACGCTCTTTGCGTTTGCACTCGATGCACgattaattcttttaaaattttgcaAAATCGATTCTTcccgttttttgttttttttgttttttttttcaccctcgcTTAACACAAAGCCCCCACATTCAGTTAATCCAACAGACAGAAAACAGGGAAAATTATTACAAAGTCGAAAACAGTCACTAACAGACATCTTTTCCTCGTTCTTTACTGACAGGATCCGATATTTGGTTTTTCATATCCTCAGTTTACACCAGATGAATCAGCAAGCAAGGGGAGATGGGCAACGGTTTGTTGTACGTTTGGTTTTTCCTGCGTATTAAAAACCccaattctttaaaatatatactgcgtTTATGACCTACATTTGATCAGGATCAGCTTGGTCAAGACCGATTGGACCGTTTATTACGAGACCACCCGAAAGATGAGCTTCAGAGGGATACTAAAACTGAACCGTCCAACCCATTTTTTAATACCCCCTTTTTGAAAAAAGCCTGCTGTACAAAGTTCTTTgtgaacaaaacaaagaaacccGGCGTGGAGTATGAGATGGACCTAAGATCATGTAAATTAatcttcagaagaaaaaaaaaaaaaagagagagagagacaaaaaaaaggtcttAACACGTATTCGAAGGCAACATCTGAGGCTAAGGACAATGATagtgacaggaaaaaaaattatattttttttaactttttacacGTACATGTATCCACAGGTTTCTTCCTAAAACTCATCAAACAGTTGTGAATATGCATTTCCATAGAGCAAAAAAATCTAGTAATTttataaaagagagagaaaaaaaaaaaaaaaaaaaaaaaggcagaagaTAAAGAAATCATGTTtagaataaaagcaaaacaaaagttacaaaatgttcatcaaaaaaaaaaaaaaaaaaatacaaaagaagtGAACGTTAGCTGTAATGGTTTATATAGGAGCTCTTTGGACTTCCTCTCCTCTCTGGCTAAAATAGTGGTGATTATAAATATCATTGTAATTGCCATGGCAACGTGCACAGCCTGGTTAGACATTCCCTCCTTACATTTACAACAGTGGCCGTCTCCGTTAGCAATAACACTGCGTGTAGgctctggattttttttaaaattctttttgtCTAGCTCTGTATTTAATCGTTTTATTCAGTTGCATacttaatacataatatatatttatatatatttatatgtaaaaatctCTTTCTCGCGACATTGGAAAGTGATGATGGTTATCTATGTGCAAAAAACTGTCATGGTACTGTAGCCTTGAATccgttggttggttggttgttGGTTGGTTTGTTAAAGGGGCATCACCACATAGGAAAGTCCATTCGATGTTAGGTTTTAGTAACGTCGGAATGCTGGCACTGCTGAAAGACACAGCAGTAAATCAGACCTCAGAGCAAAAGAACAGCTGTATATTAGAGGAGCTGGCAGGTGGACTTTTTGCGTGCCTTTCCAGGTACGGGAGTTTTCCTGTTGATTTGCCGGACCAGGTCATAGAagatctgcacacacacacacacacacacacctctcactgAATACAGACCAGATGCGTTTGCCTCAGAATTCATCTAGTGTCACTACGGCTCCAAAACCGTTTTGTAGATTGAAGATGAAATTGCTGAGGTATTTGCTAATCAtatacaaaacagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40736 True 2905 TUCP 0.39 2 9587319 9590318

Neighbor

gene id symbol gene type direction distance location
bik NA coding upstream 2807 9581569 ~ 9584512 (+)
slc26a3.2 LOC107695870,LOC107591024,LOC107725685,LOC107695899,LOC107725684,LOC107591277 coding upstream 10358 9556829 ~ 9576961 (+)
slc26a4 slc26a4,LOC107664887,LOC107695858,LOC107553866,LOC107733015 coding upstream 32759 9545685 ~ 9554560 (+)
ncaph2 ncaph2,LOC107725678,LOC107590292,LOC107732965,LOC107553878 coding upstream 213501 9355967 ~ 9373818 (+)
LOC122343440 NA coding upstream 254271 9324900 ~ 9333048 (+)
impdh1b impdh1b,LOC107725554,LOC107590397,LOC107695905,LOC107553880,LOC107664878,LOC107732997 coding downstream 50930 9641248 ~ 9654380 (+)
LOC122342846 ppfia4,LOC107675841 coding downstream 125292 9715610 ~ 9722466 (+)
LOC122342860 ppfia2,LOC107694182,LOC107755902,LOC107680027,LOC107749078 coding downstream 132789 9723107 ~ 9743552 (+)
lrrc4.1 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC108432552,LOC105904105 coding downstream 493282 10083600 ~ 10088337 (+)
pax4 LOC107695909,LOC107576795 coding downstream 570829 10161147 ~ 10164486 (+)
LOC122342620 NA non-coding upstream 30601 9554960 ~ 9556718 (+)
G27498 NA non-coding upstream 50232 9536610 ~ 9537087 (+)
G27407 NA non-coding upstream 91666 9495434 ~ 9495653 (+)
G27406 NA non-coding upstream 97627 9489070 ~ 9489692 (+)
G27405 NA non-coding upstream 99743 9487361 ~ 9487576 (+)
LOC122342587 NA non-coding downstream 70169 9660487 ~ 9673677 (+)
G27562 NA non-coding downstream 96181 9686499 ~ 9872003 (+)
G27643 NA non-coding downstream 672551 10262869 ~ 10264200 (+)
G27651 NA non-coding downstream 697160 10287478 ~ 10365571 (+)
G27731 NA non-coding downstream 1058374 10648692 ~ 10659331 (+)
G27508 LOC107695901,LOC107725636,LOC107553882 other upstream 8745 9577315 ~ 9578574 (+)
wnt7ba wnt7ba,wnt7b,LOC107591249,LOC107695867,LOC107725526,LOC107732964,LOC107664847,LOC103028473 other upstream 65286 9504080 ~ 9522033 (+)
cfap54 cfap54,LOC107695893 other upstream 191562 9381542 ~ 9395757 (+)
G27360 anks1b other upstream 360107 9163147 ~ 9227212 (+)
apaf1 apaf1,LOC107744928 other upstream 366273 9038638 ~ 9221046 (+)
G27629 NA other downstream 567841 10158159 ~ 10257553 (+)
lamtor4 si:dkey-159a18.7,lamtor4,LOC107590499,LOC107557308,LOC107694163,LOC107699063 other downstream 775394 10365712 ~ 10367925 (+)
lrtm2a lrtm2a,LOC107738823,LOC107694175,LOC107590570,LOC107732983,LOC107589042,LOC107699047 other downstream 889123 10479441 ~ 10507554 (+)
rassf8b rassf8,rassf8b,LOC107590609,LOC107589039,LOC107738830 other downstream 1071913 10662231 ~ 10675110 (+)
zmp:0000000650 LOC107694155,LOC107589077,LOC107732968,LOC107680013,LOC107574990 other downstream 1095779 10686097 ~ 10702203 (+)

Expression


Co-expression Network