G27581


Basic Information

Item Value
gene id G27581
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9697696 ~ 9744787 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40887
tatattgtagcATAATTTTTGTTGTACCCCTAACTGTCAAAGCACCAACAATTGTTTAGTGTTTAAATGTTagaatttgaaatgttattgaCATATATTCACAATGTATTGTTTGACAGTTAAGGggtaaaacaatataataatgatcTCTGTGGTCTTAAGTAAAATGTTCTCTTTCTGATTGGTTGTATATAACCTGGGCAGTATTGAGAGTTAGTATGAGATTCATCTTGTAACGCATGAAATTAAGATTCTGTTAGTCAATGAAGGTGTAATGTCGTGTAGCTTGAGGAAATGCGTTGTAAAAACAGCAACCTTTTtgactgtactttttttttttttttattgacaatgAAAAGTTGTTTGATCACCACATAGTTTTGACCAAAATACaatcagtaataaataaaaaaaaatggacacaaaataaaatgattctcTGCGCGTGCAAAACAGGGACGTACAAACCGTCGAAGTGTCTGATATAACCAAAAGACGGGGAGGTGGAGGGCTGTACAACAGACGTCCCCCGCGTCTCGAACGGAAACATTTTTACACCAAAGTAAGTCACAGCAAGTAAGTCTACTTTCACTACGAGCTAAGCCTGTCCTTCAGCGGTTTGTTCGGACACTCTCCAAACGAGGCCAGCCTATCGGCAAACAGGCGTGGCGAGAGATTTGCGTTTCGTAGTCCAAGACGAGCGCTCCGGCGGTACATTTTGTGCTACTCATGACGGGAAACAATTGGCGTTTtacgttcttttttttttttttttttaaccaaacaaTAAGAAAGGCATGTGTACGAAGTGAGAGAATATCCCAATTGCTCTATAATGCGACTTAGTGAAGGATCGATTGGCGAAAGTTTCAGAAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40887 True 878 lncRNA 0.38 2 9697696 9744787

Neighbor

gene id symbol gene type direction distance location
lepb lepb coding downstream 15309 9680186 ~ 9682387 (-)
prrt4b LOC107695904,LOC107725552,LOC107590384,LOC107664879,LOC107732996 coding downstream 23586 9654456 ~ 9674110 (-)
rap1b rap1b,LOC107695907 coding downstream 65078 9587996 ~ 9632618 (-)
mcat mcat,LOC107695903,LOC107591294,LOC107732994,LOC107725637,LOC107553884 coding downstream 110714 9583638 ~ 9586982 (-)
cbll1 LOC107695901,LOC107725636,LOC107590361,LOC107733012 coding downstream 116882 9577294 ~ 9580814 (-)
LOC122343372 dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 coding upstream 2153 9746940 ~ 9755926 (-)
snd1 snd1,LOC107738807,LOC107732977 coding upstream 271659 10016446 ~ 10157699 (-)
hgfa hgfa,LOC107738831,LOC107732993,LOC107557293,LOC107591310,LOC107695871,LOC107699067 coding upstream 421729 10166516 ~ 10186077 (-)
cacna2d1a LOC107738810,LOC107732991,LOC107699066,LOC107590440 coding upstream 457206 10201993 ~ 10264346 (-)
cdhr5-rs LOC107699064,LOC107590451,LOC107733013,LOC107738811,LOC107557309 coding upstream 530726 10275513 ~ 10290873 (-)
G27549 NA non-coding downstream 43319 9597457 ~ 9654377 (-)
G27540 LOC107732962,LOC107553866,LOC107725684,LOC107695899 non-coding downstream 129399 9565447 ~ 9568297 (-)
LOC122342618 NA non-coding downstream 145535 9547639 ~ 9552161 (-)
G27532 NA non-coding downstream 152275 9545208 ~ 9545421 (-)
G27469 NA non-coding downstream 193696 9498716 ~ 9504000 (-)
G27627 NA non-coding upstream 270395 10015182 ~ 10015754 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding upstream 338632 10083419 ~ 10138056 (-)
LOC122343524 NA non-coding upstream 577947 10322734 ~ 10349291 (-)
G27883 NA non-coding upstream 644660 10389447 ~ 10389805 (-)
G27894 lrtm2a,lrtm2,LOC107738823,LOC107590570,LOC107694175,LOC107732983 non-coding upstream 701648 10446435 ~ 10562772 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 397517 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 688392 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 756293 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 823098 8870215 ~ 8874598 (-)
slc25a3a slc25a3a,slc25a3,LOC107744906,LOC107586622,LOC108437945,LOC105897470,LOC108279629,LOC107694680,LOC107593070 other downstream 1180113 8513630 ~ 8517583 (-)
zgc:193726 NA other upstream 610924 10355711 ~ 10363566 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 740135 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 779744 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 1669933 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 1908683 11653470 ~ 11683862 (-)

Expression


Co-expression Network