G27629


Basic Information

Item Value
gene id G27629
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10158159 ~ 10257553 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40942
aaatgttttggcaCCGGGACAAATACAAGTAGAAGCGATtttggaaaagaagaaaaacagaaatctgtCACGGTCAAAAGAGTCAAGGCAAAGGACACCGCAACACTCGTACTGACGATAAAGGTTTTATTCTGAATACACCTGAACATGAATTTTAGACAGTTCCAGGggttttttcataatttttttttttttttttttttaaacaaatatacagaCTGACCGAATGAGGCAAATCAAGATTCACAAGTTATGAGTATAAATCAGTGGTTCTCAGCTGCTGGGCCACAGGGCtgttctgaagaaaaaactGATAAATGCAGACAGTCAAATTTATAAAGTCCAAATTGCAAATtatgagcttttttttcctcagaagtgcatgatataaactcacaattctgagaaaaaaatattcatatctcgcagttctgactttattaCCCAGAATTGCGAGATGACATCGTGAGATAAAAAGcgttacatttttgttttagttaccAATTacctttttgcttttaattcagTGGTGGAAACCATAGAAGAACATAAAATTGCCcccaagttaaaaaaaataaaatacaaaaatacagtatgacACATTAAGAGACTGTACATTTAAGttgtatctttttaaataatctttttaaagaaagaagcAAACGCTTCCTTTATCTTTTGCAGTTGCCGTCAAATATCTTCGcaatttaatttgtcattttaatagaaGCTATTTAACCAAATTAGGCCGATGACAACGCGGTTATTTGAAATTGCTCGGAAACCatgaacagttaaaaaaaattaaaaatacaacccAGACCGCATTAAATGCTGGTATTGTTTGAGTCGCCACTTAAAATCTGGTTCCCGAAGCAAATCCAGATGCGAACCACTGAATGACAGTAAAATGAAGGGGGACTGAAAATAAGCCCACGGATGAAGTCCTCCTAAACCCTGACTGAGGCAGACTGACGGTCAGCCAGGAGGCAAGCGGAGGCAGCAGGATCCGACTGACCGCTAAAAACACACTTCACGCTATCGGACAGCTCCAGAGATCAAAACCCACGCAGACCAGACAGAcagcttttttctgttttctgttccCGAGGTGACAGCATCTGAGCTCAGCCCGTAGACCGAAGCCTTTCTTCATCCCGGTTTGTCTGAAGGACTAAAGTTGCTAAATCTAATTCAGTATTTTCCAAGGAATAATATGAATTGATCTCGTATTTCCCCTAAACATCTGTCTTTTTGATATTCTAGAAAACACTTTCACCTCTATTAAGGTATCCTGTAAACAATTTCTGTCAGAAGCTGGAGACCCTTAATTCTTTCAAATAGTGGTCCCAAATCAGTTTTGAcatttaaggttagggttagctTGGACCGTCAGGATCGGGATACGTCTCGGTTCAGCAGCTGTCGCCCCGAGAAAAAGGCAGTGAATGTTAAGGTGAGGTCACATTGACAAAATTTCAGCGAGATTTCGAGGAACAAAAAAATGGCGATAGCGCAACTGACGCATGAAGCGCGGCTCACTTTCAAAGCCAGCGGGAAAAACGGTCGCCAAATCGCAGCGGATGTATCCCACAAAATCTTGCTAAATGTGATTTCACCTTTAAGGTCTGACTAGAAATGAGTTTTTCCGTATTCGACATCGTCACACACAGAAAAGCTACGGTTTgcgattttttattttttttttggtatgacagacaaaaaacatttcGGAGGCAGTTTGTAGACGTGATCGGCACAACATGTGGtcgtatttttatatatttttttttaacacgcaCAGATTTCAGACGGACTAGTGCGCAGAGACCTTTAGGCTGCGTCCAGAATGGAATATTAGCATACTACACTAATCTGCTGAATGCTGCCCGGTGTGCTCTGTCTTGTCTGTTTTAAACCGTGGACATTATTCCCACGCTAAACGTTCCAAACGGTAGAATGCTACATTGTCACATCATCATCAGATTTgtacaaatatgtacatttttgcagtcagtttcaaaaaaaaagctgtagaCTGCTGCACATACGAGGAAAAATGTTTCATTCTGCGAATATAGCAGTAGTATGCTAGTACGCTTTTCTGAACAGACCCCGTAATGCGTTACTATACACGCTCCGGCATCTACAAAAGGGAAATATTGTAGCGTCACACACACGGAAGCAGACGtgcacatgcacgcacacacacacacagcttagTTTCACTTCCAGTGCAACACATGGCGAATAAATAGGGCATAAGGAAGAGACAGGACGAAGTGACGATGAAGTGTCAAGGTCTGCCCACCCAGGCTGTGAGTGATCGCGGCTTGAGTTTTGTACTTCCTGGGTCAGAGCCTCTCCCTCCGTGTGCTGGGCTGTGGCGTGGGAGTCCGGACGAACGGTCAAATGTGGCAAGTTTTGGCATCGTAGAGGGGTGTGGCGTCTCTGCGCTGAGGTCACGAGAGTCCGTGTCCTCGTCCGATCAGAAGCCAGAGGAGCGGCAGCTGGAGGATGACCACGGACACCACAGATGGACTCAGACCCGACGCACCACCGCAATCCTCGTTCTGCT
>TU40943
tttttttttttttttttttttttttttttttttttttttttTACTGACGATAAAGGTTTTATTCTGAATACACCTGAACATGAATTTTAGACAGTTCCAGGggttttttcataatttttttttttttttttttttaaacaaatatacagaCTGACCGAATGAGGCAAATCAAGATTCACAAGTTATGAGTATAAATCAGTGGTTCTCAGCTGCTGGGCCACAGGGCtgttctgaagaaaaaactGATAAATGCAGACAGTCAAATTTATAAAGTCCAAATTGCAAATtatgagcttttttttcctcagaagtgcatgatataaactcacaattctgagaaaaaaatattcatatctcgcagttctgactttattaCCCAGAATTGCGAGATGACATCGTGAGATAAAAAGcgttacatttttgttttagttaccAATTacctttttgcttttaattcagTGGTGGAAACCATAGAAGAACATAAAATTGCCcccaagttaaaaaaaataaaatacaaaaatacagtatgacACATTAAGAGACTGTACATTTAAGttgtatctttttaaataatctttttaaagaaagaagcAAACGCTTCCTTTATCTTTTGCAGTTGCCGTCAAATATCTTCGcaatttaatttgtcattttaatagaaGCTATTTAACCAAATTAGGCCGATGACAACGCGGTTATTTGAAATTGCTCGGAAACCatgaacagttaaaaaaaattaaaaatacaacccAGACCGCATTAAATGCTGGTATTGTTTGAGTCGCCACTTAAAATCTGGTTCCCGAAGCAAATCCAGATGCGAACCACTGAATGACAGTAAAATGAAGGGGGACTGAAAATAAGCCCACGGATGAAGTCCTCCTAAACCCTGACTGAGGCAGACTGACGGTCAGCCAGGAGGCAAGCGGAGGCAGCAGGATCCGACTGACCGCTAAAAACACACTTCACGCTATCGGACAGCTCCAGAGATCAAAACCCACGCAGACCAGACAGAcagcttttttctgttttctgttccCGAGGTGACAGCATCTGAGCTCAGCCCGTAGACCGAAGCCTTTCTTCATCCCGGTTTGTCTGAAGGACTAAAGTTGCTAAATCTAATTCAGTATTTTCCAAGGAATAATATGAATTGATCTCGTATTTCCCCTAAACATCTGTCTTTTTGATATTCTAGAAAACACTTTCACCTCTATTAAGGTATCCTGTAAACAATTTCTGTCAGAAGCTGGAGACCCTTAATTCTTTCAAATAGTGGTCCCAAATCAGTTTTGAcatttaaggttagggttagctTGGACCGTCAGGATCGGGATACGTCTCGGTTCAGCAGCTGTCGCCCCGAGAAAAAGGCAGTGAATGTTAAGGTGAGGTCACATTGACAAAATTTCAGCGAGATTTCGAGGAACAAAAAAATGGCGATAGCGCAACTGACGCATGAAGCGCGGCTCACTTTCAAAGCCAGCGGGAAAAACGGTCGCCAAATCGCAGCGGATGTATCCCACAAAATCTTGCTAAATGTGATTTCACCTTTAAGGTCTGACTAGAAATGAGTTTTTCCGTATTCGACATCGTCACACACAGAAAAGCTACGGTTTgcgattttttattttttttttggtatgacagacaaaaaacatttcGGAGGCAGTTTGTAGACGTGATCGGCACAACATGTGGtcgtatttttatatatttttttttaacacgcaCAGATTTCAGACGGACTAGTGCGCAGAGACCTTTAGGCTGCGTCCAGAATGGAATATTAGCATACTACACTAATCTGCTGAATGCTGCCCGGTGTGCTCTGTCTTGTCTGTTTTAAACCGTGGACATTATTCCCACGCTAAACGTTCCAAACGGTAGAATGCTACATTGTCACATCATCATCAGATTTgtacaaatatgtacatttttgcagtcagtttcaaaaaaaaagctgtagaCTGCTGCACATACGAGGAAAAATGTTTCATTCTGCGAATATAGCAGTAGTATGCTAGTACGCTTTTCTGAACAGACCCCGTAATGCGTTACTATACACGCTCCGGCATCTACAAAAGGGAAATATTGTAGCGTCACACACACGGAAGCAGACGtgcacatgcacgcacacacacacacagcttagTTTCACTTCCAGTGCAACACATGGCGAATAAATAGGGCATAAGGAAGAGACAGGACGAAGTGACGATGAAGTGTCAAGGTCTGCCCACCCAGGCTGTGAGTGATCGCGGCTTGAGTTTTGTACTTCCTGGGTCAGAGCCTCTCCCTCCGTGTGCTGGGCTGTGGCGTGGGAGTCCGGACGAACGGTCAAATGTGGCAAGTTTTGGCATCGTAGAGGGGTGTGGCGTCTCTGCGCTGAGGTCACGAGAGTCCGTGTCCTCGTCCGATCAGAAGCCAGAGGAGCGGCAGCTGGAGGATGACCACGGACACCACAGATGGACTCAGACCCGACGCACCACCGCAATCCTCGTTCTGCT
>TU40944
tttttttttttttttttttttttttttttttttttttttttTACTGACGATAAAGGTTTTATTCTGAATACACCTGAACATGAATTTTAGACAGTTCCAGGggttttttcataatttttttttttttttttttttaaacaaatatacagaCTGACCGAATGAGGCAAATCAAGATTCACAAGTTATGAGTATAAATCAGTGGTTCTCAGCTGCTGGGCCACAGGGCtgttctgaagaaaaaactGATAAATGCAGACAGTCAAATTTATAAAGTCCAAATTGCAAATtatgagcttttttttcctcagaagtgcatgatataaactcacaattctgagaaaaaaatattcatatctcgcagttctgactttattaCCCAGAATTGCGAGATGACATCGTGAGATAAAAAGcgttacatttttgttttagttaccAATTacctttttgcttttaattcagTGGTGGAAACCATAGAAGAACATAAAATTGCCcccaagttaaaaaaaataaaatacaaaaatacagtatgacACATTAAGAGACTGTACATTTAAGttgtatctttttaaataatctttttaaagaaagaagcAAACGCTTCCTTTATCTTTTGCAGTTGCCGTCAAATATCTTCGcaatttaatttgtcattttaatagaaGCTATTTAACCAAATTAGGCCGATGACAACGCGGTTATTTGAAATTGCTCGGAAACCatgaacagttaaaaaaaattaaaaatacaacccAGACCGCATTAAATGCTGGTATTGTTTGAGTCGCCACTTAAAATCTGGTTCCCGAAGCAAATCCAGATGCGAACCACTGAATGACAGTAAAATGAAGGGGGACTGAAAATAAGCCCACGGATGAAGTCCTCCTAAACCCTGACTGAGGCAGACTGACGGTCAGCCAGGAGGCAAGCGGAGGCAGCAGGATCCGACTGACCGCTAAAAACACACTTCACGCTATCGGACAGCTCCAGAGATCAAAACCCACGCAGACCAGACAGAcagcttttttctgttttctgttccCGAGGTGACAGCATCTGAGCTCAGCCCGTAGACCGAAGCCTTTCTTCATCCCGGTTTGTCTGAAGGACTAAAGTTGCTAAATCTAATTCAGTATTTTCCAAGGAATAATATGAATTGATCTCGTATTTCCCCTAAACATCTGTCTTTTTGATATTCTAGAAAACACTTTCACCTCTATTAAGGTATCCTGTAAACAATTTCTGTCAGAAGCTGGAGACCCTTAATTCTTTCAAATAGTGGTCCCAAATCAGTTTTGAcatttaaggttagggttagctTGGACCGTCAGGATCGGGATACGTCTCGGTTCAGCAGCTGTCGCCCCGAGAAAAAGGCAGTGAATGTTAAGGTGAGGTCACATTGACAAAATTTCAGCGAGATTTCGAGGAACAAAAAAATGGCGATAGCGCAACTGACGCATGAAGCGCGGCTCACTTTCAAAGCCAGCGGGAAAAACGGTCGCCAAATCGCAGCGGATGTATCCCACAAAATCTTGCTAAATGTGATTTCACCTTTAAGGTCTGACTAGAAATGAGTTTTTCCGTATTCGACATCGTCACACACAGAAAAGCTACGGTTTgcgatttttttttttttttttttttttttta

Function

GO:

id name namespace
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055002 striated muscle cell development biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40942 True 2578 TUCP 0.42 3 10198646 10203768
TU40943 False 2510 TUCP 0.41 4 10158159 10203768
TU40944 False 1650 lncRNA 0.37 3 10158159 10257553

Neighbor

gene id symbol gene type direction distance location
lrrc4.1 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC108432552,LOC105904105 coding upstream 69822 10083600 ~ 10088337 (+)
LOC122342860 ppfia2,LOC107694182,LOC107755902,LOC107680027,LOC107749078 coding upstream 414607 9723107 ~ 9743552 (+)
LOC122342846 ppfia4,LOC107675841 coding upstream 435693 9715610 ~ 9722466 (+)
impdh1b impdh1b,LOC107725554,LOC107590397,LOC107695905,LOC107553880,LOC107664878,LOC107732997 coding upstream 503779 9641248 ~ 9654380 (+)
bik NA coding upstream 573647 9581569 ~ 9584512 (+)
gcc1 LOC107732988,LOC107738815,LOC107590505,LOC107694160,LOC107699059,LOC107557305,LOC107557306 coding downstream 111786 10369339 ~ 10374317 (+)
ppp6r2a ppp6r2a,LOC107557302,LOC107699058,LOC107733000,LOC107694165,LOC107738817 coding downstream 125066 10382619 ~ 10397829 (+)
ccdc146 LOC107694170,LOC107738828,LOC107591091,LOC107732959 coding downstream 190726 10448279 ~ 10463617 (+)
cacna1c cacna1c,LOC107590584,LOC107732972 coding downstream 270492 10528045 ~ 10642451 (+)
LOC122342684 NA coding downstream 457207 10714760 ~ 10716607 (+)
G27562 NA non-coding upstream 286156 9686499 ~ 9872003 (+)
LOC122342587 NA non-coding upstream 484482 9660487 ~ 9673677 (+)
LOC122342620 NA non-coding upstream 601441 9554960 ~ 9556718 (+)
G27498 NA non-coding upstream 621072 9536610 ~ 9537087 (+)
G27407 NA non-coding upstream 662506 9495434 ~ 9495653 (+)
G27643 NA non-coding downstream 5316 10262869 ~ 10264200 (+)
G27651 NA non-coding downstream 29925 10287478 ~ 10365571 (+)
G27731 NA non-coding downstream 391139 10648692 ~ 10659331 (+)
G27729 NA non-coding downstream 396151 10653704 ~ 10658141 (+)
G27754 NA non-coding downstream 918871 11176424 ~ 11178043 (+)
G27490 NA other upstream 567841 9587319 ~ 9590318 (+)
G27508 LOC107695901,LOC107725636,LOC107553882 other upstream 579585 9577315 ~ 9578574 (+)
wnt7ba wnt7ba,wnt7b,LOC107591249,LOC107695867,LOC107725526,LOC107732964,LOC107664847,LOC103028473 other upstream 636126 9504080 ~ 9522033 (+)
cfap54 cfap54,LOC107695893 other upstream 762402 9381542 ~ 9395757 (+)
G27360 anks1b other upstream 930947 9163147 ~ 9227212 (+)
lamtor4 si:dkey-159a18.7,lamtor4,LOC107590499,LOC107557308,LOC107694163,LOC107699063 other downstream 108159 10365712 ~ 10367925 (+)
lrtm2a lrtm2a,LOC107738823,LOC107694175,LOC107590570,LOC107732983,LOC107589042,LOC107699047 other downstream 221888 10479441 ~ 10507554 (+)
rassf8b rassf8,rassf8b,LOC107590609,LOC107589039,LOC107738830 other downstream 404678 10662231 ~ 10675110 (+)
zmp:0000000650 LOC107694155,LOC107589077,LOC107732968,LOC107680013,LOC107574990 other downstream 428544 10686097 ~ 10702203 (+)
LOC122342850 LOC107740709 other downstream 449579 10707132 ~ 10708947 (+)

Expression


Co-expression Network