CI01000004_07755406_07758041


Basic Information

Item Value
gene id CI01000004_07755406_07758041
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7755167 ~ 7758041 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_07755406_07758041.mRNA
ATGGATCAACCAAGAAGGCATCTTAAAAAGCTGAAAAAAAGACGTTCAAGTCTATTTGCAAGTGTCAAACTTAATGCCAGCTTTTCACAGAGTATAGAGGAAGAAGAGAGTGCCTTTCCTTTTTCACAAGACAGCTCTGTGAAACCTTGGACGTCAATGGACAACCTTGATACTCCATCACCTCAGGCAAGTGACAAAAGAGATCAAGAAAAGAGGAAAGGCAGTGATGCTGAAGCAGCAAAGATGCCACACCGCCATTCAACTGTGATCAATGTTAATGTAGGTGGGAAAGTCTTTACTATTCCCAAGCACCTGGCTATCAGATACCCTAAAACAAGAATAGGCAGCTTAGCCCTGTGTAAGGATCCCGTCAAGCAGCTAACGCTCTGCGATGACTATTGTGTGATCACTAATGAGTTTTTCTTTGACCGAGATCCTACTTTCTTCCACTACATCTTCCACTTTTACTGTAGCAATGTATTATGGGTAATGGAGAGTCTTTGCCCTGTCAATTTTGAGGAGGAAATGCAGTTTTGGGGCCTGCACTTGAGGGACACTCCCCGGTGTTGCCGCATTCTCTATGAGGAGAAAATAGATGAAATAAGAGACCAGCTGAAAGTGAACAGAGAGCTAATGGCGGAAATTGAGCCTCAGCACAATGAGGCGGGTTTCAAGACAATGTTTTTGGGTGGTGTTCGTAAGGTGCTATGGGACCTGATGGAGAACCCATACTCCTCGATGGCTGCTAAGGCTTTTGCTGTGTTCTCCAGCCTCTTTGTGCTCATCTCCATCGTAGCGATGACTCTAAATACTGTAAACGAACTGAAAGATTATAAAATCTATGGAAGAACCTATATGGAGTGTGTGGAGATCACCTCAATTCTCTTCTTCACTTTTGAGTACTTCCTTCGCTTGCTGACAACTTGTGACGTCAAGCATTTTTTGAAGAGTGCACTTAATTTAGTAGACTTAGTGGCTGTCATGCCTTACTTTATCCAGCTGATATTTGAGGCTTTTGCTGACCAGGAAGATCTCAGCGTCCAAGATGACCTGAAAACCATGGCGAGGGTTAGCAAAGTTAGCAAAGTGCTTAAAGTTGTCAAACTCATGCGAATCTTTCGCATTCTGAAACTGGCGAGGCACTCGACAGGGATGCGGGCGTTTGGCTTCACTCTTCGCCAGTGTTTTGAACAGGTCTGCTGTCTGTTTCTGTTTATTATCATGGGGATCTTCACCTTCTCTGCCCTAATGCACTCAGTGGAGCAGGATGTTGTAGGAACACCTTTTAGCAGTATACCCGATGCTTGGTGGTGGGCAGCGGTGAGCATCTCTACTGTGGGCTATGGAGATGTGGTGCCCATATCGTACTCCGGTCGAGTGGTGGCCTTCGGGTGCATATCTTTCGGCATTATTTTGAACGGAATGCCAATCTCCATCCTATTTAACAAATTTTCTGACTATTATGCCAAGCTGAAGGCCCAGGAGTGCACTAACACAAAAGTCCAGCATGGACTGAACCTCAAGAAAAGATTGCGAAGGAAATTCGAGAACTGCTTTGAGCCTCTAGCTGAGGAGTCTGATGAGGACAATAGACATCACACCGGCCAGTGTCATCACTGAATGTCCTTGTCATCCACCCTGCCTTCACTGCCCTTGAACAGACAGCTCAGGTCCCCAGCCTGCCTTGAATTAAATAGGGATTTAAAAGATGGGTGAACGCCAGGTTAAAGAAAATTAAGCCATTAGCTTTAAGATGGCTTACAAATGGCATGTCGCTGAGGATCTTTGGCGAAATACTTTGTGTTGGTTTTTTGGCAGTATCTATTCAGTTGTCAAATAATTTCAGGCATTTAAATAAA

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_07755406_07758041.mRNA True 1859 mRNA 0.45 2 7755167 7758041

Neighbor

gene id symbol gene type direction distance location
CI01000004_07751113_07751701 NA coding downstream 3412 7750451 ~ 7751755 (-)
CI01000004_07712568_07742293 KCNN1, KCNN1A, KCNN1B coding downstream 12874 7712478 ~ 7742293 (-)
CI01000004_07705722_07707545 NA coding downstream 47322 7705707 ~ 7707845 (-)
CI01000004_07693733_07699887 NA coding downstream 55280 7693484 ~ 7699887 (-)
CI01000004_07670856_07673369 NA coding downstream 81215 7670512 ~ 7673952 (-)
CI01000004_07784930_07788318 CNN2 coding upstream 25643 7783684 ~ 7788507 (-)
CI01000004_07792267_07797908 CRSP7 coding upstream 33857 7791898 ~ 7798462 (-)
CI01000004_07805884_07817962 CRTC1 coding upstream 47612 7805653 ~ 7818936 (-)
CI01000004_07829094_07830772 NA coding upstream 70962 7829003 ~ 7830813 (-)
CI01000004_07960123_07960701 NA coding upstream 202063 7958746 ~ 7961208 (-)
G29598 NA non-coding downstream 89173 7665757 ~ 7665994 (-)
G29575 NA non-coding downstream 200834 7552532 ~ 7554333 (-)
G29568 NA non-coding downstream 224832 7530126 ~ 7530335 (-)
G29343 NA non-coding downstream 367311 7387581 ~ 7387856 (-)
G29334 NA non-coding downstream 367770 7385073 ~ 7387397 (-)
G29551 NA non-coding upstream 1617 7759658 ~ 7761020 (-)
G29544 NA non-coding upstream 17232 7775273 ~ 7780067 (-)
G29542 NA non-coding upstream 40509 7798550 ~ 7800281 (-)
G29556 NA non-coding upstream 42406 7800447 ~ 7800752 (-)
G29552 NA non-coding upstream 42916 7800957 ~ 7804228 (-)
G29388 NA other downstream 1123260 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 1209595 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 2127653 5616644 ~ 5628289 (-)
G27746 NA other downstream 2551443 5178227 ~ 5203724 (-)
G26788 NA other downstream 4479446 3267683 ~ 3275721 (-)
G29656 NA other upstream 206323 7964364 ~ 7965500 (-)
G29746 NA other upstream 596457 8354498 ~ 8358127 (-)
G30316 NA other upstream 1619896 9377937 ~ 9406921 (-)
G31203 NA other upstream 2988396 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 3649424 11406957 ~ 11412907 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016380 si:rp71-39b20.4 coding NC_007113.7 CM002886.2 24495804 ~ 24505185 (-)