zgc:193726


Basic Information

Item Value
gene id zgc:193726
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10355711 ~ 10363566 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU40990
CCGCACACATGCAGATATTTAAAGAGCGTCTGAATCCCCTGAGAATAAACCCAGCTCCGATCTGCTTCATTCTCATTCGGTGCGTTCAGTAAGTCAGCGTCTGATCGTCATGATTCTTGTCTGGACTCTCACCTCTCTCGTCCTCAGCTACACTCTTGGGTTCCCCGTGCTTAATAACACGAGCAGTGGATCCCATATGGAGACTTTAATCAATGCCACAATAGGGAACTTCACAGTGTATAATGCGACCAAAGAAcaaaggAGTCCTTTCATCCTGCCGGGGACAAGAGGTATAGGATGTGCACTGGCTACCTGTGCCACAGAAAATCTGGTCGACCGCATGCAGACTGGGGATGAGAAAGCAGGGGACCGTGCAAATGATGCATTGGGGCCTGGGAAAAAATAAGAGCATTGcttatttgattgttttcagACACATCTATTTGTCttggtcattttaatttgacattttattattcatgcaaagagagaaaatacaGAATTATGTTTTCAACATATTAATGTCATCACCACAGTGCACACTaatgtagaataaaatattattttttccca
>XM_043238031.1
GGCAAGGAGCTGTATTTAAGTTAAACCCAGCTCCGATCAGCTTCATTCTCATTCGGTGCGTTCAGTAAGTCAGCGTCTGATCGTCATGATTCTTGTCTGGACTCTCACCTCTCTCGTCCTCAGCTGCACTCTTGGGTTCCCCGTGCTTAATAACACGAGCAACTCTTACACGAAGGCGTTCCCCAACGTCACAGAGAGGAACATCACCGTGGATGTTCAGAAGACCAATCAGACCAGTTACCAACTGCCGATGTACTTTGCTCCTGAATTAATCCCaCCAGAAGTACTGACAGATCTTCCAAATCTCCAAATGGCGGCAGCACCAGGATGTTCTTTGGCTACCTGTGCCATACAAACTCTAGCCCACAGGATGCAGATCGGGAATGAGAAAGCAGGGGACAGCGCAAGTGATGCATGGGGGCTCGGGAAAAAATAAGACATGTATAGGCGCATAAAGGTTACTTTTATTTGATTGCTTTGAAGACACATTTAATCGTAAAATCTCTTTCCATTGAGCCTCAAGATTGAGAGCAATTATAGATATGTACGCGATCGATGCTACTCTAATGTCATCTCTTTTcacaagtgaaaaataaaatcgttTGTATTACCATA
>XM_043238033.1
TTGAAAAGGCAAGGAGCTGTATTTAAGTTAAACCCAGCTCCGATCAGCTTCATTCTCATTCGGTGCGTTCAGTAAGTCAGCGTCTGATCGTCATGATTCTTGTCTGGACTCTCACCTCTCTCGTCCTCAGCTGCACTCTTGGGTTCCCCGTGCTTAATAACACGAGCAGTGGATCCCATATGGAGACTTTAATCAATGCCACAATAGGGAACTTCACAGTGTATAATGCGACCAAAGAAcaaaggAGTCCTTTCATCCTGCCGGGGACAAGAGGTATAGGATGTGCACTGGCTACCTGTGCCACAGAAAATCTGGTCGACCGCATGCAGACTGGGGATGAGAAAGCAGGGGACCGTGCAAATGATGCATTGGGGCCTGGGAAAAAATAAGAGCATTGcttatttgattgttttcagACACATCTATTTGTCttggtcattttaatttgacattttattattcatgcaaagagagaaaatacaGAATTATGTTTTCAACATATTAATGTCATCACCACAGTGCACACTaatgtagaataaaatattattttttccca
>XM_043238034.1
CCCTGAGAATAAACCCAGCTCCGATCTGCTTCATTCTCATTCGGTGCGTTCAGTAAGTCAGCGTCTGATCGTCATGATTCTTGTCTGGACTCTCACCTCTCTCGTCCTCAGCTACACTCTTGGGTTCCCCGTGCTTAATAACACGAGTGGATCCCATATGGAGACTTTAATCAATGCCACAATAGGGAACTTCACAGTGTATAATGCGACCAAAGAAcaaaggAGTCCTTTCATCCTGCCGGGGACAAGAGGTATAGGATGTGCACTGGCTACCTGTGCCACAGAAAATCTGGTCGACCGCATGCAGACTGGGGATGAGAAAGCAGGGGACCGTGCAAATGATGCATTGGGGCCTGGGAAAAAATAAGAGCATTGcttatttgattgttttcagACACATCTATTTGTCttggtcattttaatttgacattttattattcatgcaaagagagaaaatacaGAATTATGTTTTCAACATATTAATGTCATCACCACAGTGCACACTaatgtagaataaaatattattttttccca
>XR_006250794.1
CTGTCAGCTCCCAAATATTTTCAGAACATCGATAAGGTCTCATCAGTCGCCTGTCCCCCGTCTCAAGGACAAAACCTACTCTGGCTTGTGGGAATCGCACACAGCTGAGATCCCTAAAAGATGAAAGAGCTTTTGAAAAGCCCCTGAATTGTATTTAAGCTCAATTCAGCTCTGATCCGCTTCATTCACATTCAGTGTGTTCAGTAAGGCAGCGCTGGTGATGAACACCATGATTCTTGTCTGGACTCTCAGCTTTCTGATCCTCAGCTACACTCTTGGGGTTTCCATACCTAATGGCACAAGTGTATCTCACATGGAGACTTTTCCCAACGTAACACAGAAAAACTCCACAGAGTATATTAAGACCAATCTGACGCTCAGtaTACAAAAAAGGCCTTCTCCTGTATCTCACATGGAGACTTTTCCCAACGTAACACAGAAGAACTCCACAGAGTATATTAAGACCAATCTGACGCTCAGgATACAAAAAAGGCCTTCTCCcCGAAGGCATTGTTTTCTGTCCACTTGTGCCCTGTCGAACCTGGGGTCAAGGCTACAGGCTGGAAATGCGATTGCTGGGGACATGACCCGTGATCCACTGGGAATCGGCAAGAAATAAAGCATGTGAATGATCAAAGACTGTTTTGACTGTCTGCATTAATGCACTGCAGTGAAGCGATCTTGTGCTTGCTGTAATATTCTGTGAAAACCAGATTTATTTAGGCATGCTGTGTTAAGATGCTCTCAGCATCTTATTCTTTTACAGTAGTCTTGTGATGCTTCTGTTTTCGTTTTAAGAATAATTATAGTTAAATCCATAGAGTGAAAGCCGTCCAGTCTAGCAGAAATGagtttttagccatttttattttaaaccttgCACATTATATGGAAAATAGTACAGCATGTTGCAATTTTTGTATTCTTATGTGGCTGATTTTATGGGCAAATCATGCATGGGTCTTTTTTTgtagatgaaaaagaaaataatattccTATGAAATAGGAGATTTCTGTAAAACTTCGACAAGTGATTTTTCTgtaataaagtcatttttatattataagttggctcaaaaacacacattataacATGAAAATGCAACAATATAAAAGGGAATGCCCGTTGTCGTCTTATGTTGTATAATAAATCAGGAAATGTTTAGGCCCAAATTCTGCAATGCAATTCAAACTTTCAGCATTacatataatttcattattgtttttgttcctgTGTTACACAATGTAGAAACtcgacagaaaaaaaagaagaaaaaaaaaagaaacatcctCTCACGTTCAACAGTCAATTTCCTAACatgcataaatgaaatataagcAAAATGTTAAACAACTGATACATAAAGAGCtgacacataaataaaactatgcAAAAATTGATTACGGTTCAATGGACAAGTATGAAAACATCTCATCATTTCATATCATGAACTAACGTTATGTTAGGTGTCTAGCTTGGTTAAATGTTATGCGTGGCAATTCAataacacaatgtttttttctcaatataacacattcaaaacaaacttttttgatAGCATTCTACTACAAATATCACACACTTCAGacaaaaaatctgtcatttttccATAGTAAGTGCCTtggaattgatttatttattatactcaTATGACATATTTGATCTCTCATGCTACGAAACACTGATTGACTCTATTCAGTTGActctgtctgtcttttaaatatcttatttaAGGACAAAACCAACTCACACACAGATGCCATATGAACATGAGCTTTTGAGTCctctgaaaaattaaatgtacagttaaatCAGCTCGGGTCTGATACTtctgttcaggtgtgttttctttttcagcagCGGATCCCACGTGGAGACTTTTGTCACAAAGAAGATTGAGATAAGCTAGAAACATTTTGAACTGGGCCTGAGGTGGGAAAGCAAAAGTCACAAATTTAGACCTTGAATGCAaacatgctaaatatatataaaagagcattttctctttttatactACAAAACATTGATAAGGTCTCATCAATTCGTCTCCGTctgtcttttaaatgtttgtccCTGTCTTATCCAAGGACAAAACCAACTTCTCCCTGTGGGaaccacacacatatacagatcACTAACAGATGAAAGAGCTTTTGAAAAGGCAAGGAGCTGTATTTAAGTTAAACCCAGCTCCGATCAGCTTCATTCTCATTCGGTGCGTTCAGTAAGTCAGCGTCTGATCGTCATGATTCTTGTCTGGACTCTCACCTCTCTCGTCCTCAGCTGCACTCTTGGGTTCCCCGTGCTTAATAACACGAGCAGCAACTCTTACACGAAGGCGTTCCCCAACGTCACAGAGAGGAACATCACCGTGGATGTTCAGAAGACCAATCAGACCAGTTACCAACTGCCGATGTACTTTGCTCCTGAATTAATCCCaCCAGAAGTACTGACAGATCTTCCAAATCTCCAAATGGCGGCAGCACCAGGATGTTCTTTGGCTACCTGTGCCATACAAACTCTAGCCCACAGGATGCAGATCGGGAATGAGAAAGCAGGGGACAGCGCAAGTGATGCATGGGGGCTCGGGAAAAAATAAGACATGTATAGGCGCATAAAGGTTACTTTTATTTGATTGCTTTGAAGACACATTTAATCGTAAAATCTCTTTCCATTGAGCCTCAAGATTGAGAGCAATTATAGATATGTACGCGATCGATGCTACTCTAATGTCATCTCTTTTcacaagtgaaaaataaaatcgttTGTATTACCATA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576030 isoform X4

GO:

id name namespace
GO:0042594 response to starvation biological_process
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40990 False 573 TUCP 0.43 4 10355711 10357205
XM_043238031.1 False 615 mRNA 0.45 5 10358424 10360391
XM_043238033.1 False 556 mRNA 0.42 4 10355711 10360398
XM_043238034.1 False 534 mRNA 0.43 4 10355711 10357169
XR_006250794.1 True 2779 transcript 0.38 10 10358424 10363566

Neighbor

gene id symbol gene type direction distance location
drd4-rs drd4-rs,LOC107591318,LOC107738833,LOC107557292,LOC107732971,LOC107699035,LOC108432516 coding downstream 35538 10301342 ~ 10320173 (-)
cdhr5-rs LOC107699064,LOC107590451,LOC107733013,LOC107738811,LOC107557309 coding downstream 64838 10275513 ~ 10290873 (-)
cacna2d1a LOC107738810,LOC107732991,LOC107699066,LOC107590440 coding downstream 91365 10201993 ~ 10264346 (-)
hgfa hgfa,LOC107738831,LOC107732993,LOC107557293,LOC107591310,LOC107695871,LOC107699067 coding downstream 169634 10166516 ~ 10186077 (-)
snd1 snd1,LOC107738807,LOC107732977 coding downstream 198012 10016446 ~ 10157699 (-)
atp6v1f atp6v1f,LOC107590479,LOC101079638,LOC107557307,LOC106511462 coding upstream 539 10364105 ~ 10365584 (-)
dennd6b dennd6b,LOC107738816,LOC107590515,LOC107694164,LOC107732989,LOC107557304 coding upstream 10062 10373628 ~ 10381715 (-)
fam3c fam3c,LOC107738818,LOC107694166,LOC107699057,LOC107733009 coding upstream 34525 10398091 ~ 10403758 (-)
si:dkey-159a18.1 LOC107694153,LOC107591329,LOC107738834,LOC107699055 coding upstream 41033 10404599 ~ 10413735 (-)
cep83 LOC107694167,LOC107738819,LOC107591083,LOC107699054 coding upstream 50629 10414195 ~ 10421161 (-)
LOC122343524 NA non-coding downstream 6420 10322734 ~ 10349291 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding downstream 217655 10083419 ~ 10138056 (-)
G27627 NA non-coding downstream 339957 10015182 ~ 10015754 (-)
G27581 NA non-coding downstream 610924 9697696 ~ 9744787 (-)
G27549 NA non-coding downstream 701334 9597457 ~ 9654377 (-)
G27883 NA non-coding upstream 25881 10389447 ~ 10389805 (-)
G27894 lrtm2a,lrtm2,LOC107738823,LOC107590570,LOC107694175,LOC107732983 non-coding upstream 82869 10446435 ~ 10562772 (-)
G27910 NA non-coding upstream 286332 10649898 ~ 10659974 (-)
G27940 NA non-coding upstream 351064 10714630 ~ 10720284 (-)
LOC122342624 LOC107694146 non-coding upstream 567031 10930597 ~ 10932401 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 1055532 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 1346407 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 1414308 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 1481113 8870215 ~ 8874598 (-)
slc25a3a slc25a3a,slc25a3,LOC107744906,LOC107586622,LOC108437945,LOC105897470,LOC108279629,LOC107694680,LOC107593070 other downstream 1838128 8513630 ~ 8517583 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 121356 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 160965 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 1051154 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 1289904 11653470 ~ 11683862 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 1478399 11841965 ~ 11996639 (-)

Expression


Co-expression Network