ndufb2 (ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676)


Basic Information

Item Value
gene id ndufb2
gene name ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 11689314 ~ 11691129 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41253
ATCACAGCGCTCGTTATTAGCAGGCCAGCGGAACGAAGGTGACATTTAGCCGCTCCGCTAGCGCAGCTCATTTGATCCCAACGAGTTGCGAAAAGAGCTGCGGCATAAATACAAGCATGTCTTCCCTGAGGAGGACGACGGGTGTCCTCCGGACCGGCCTGCAGCTCCTCAGACGCGGACCTCAGCAGGTGACAGTCAGAAAGGCAGGAGGAGGCCCTCATATTGAACCCCAATACAGACAACCTCCTATTCTCACCAAGAACCAGAAGTTTCAAGCAGAGCTGCTCAGCGGCGCCATGTGGTTCTGGATCCTGTGGCACTTCTGGCACGACCCCGACGCCGTCATGGGTCATTTCCCGTGGCCGGACACTTCGGCGTGGACCGACAAGGAGCTGGGAATCCCACCTGACGATGAAGAGTAGATTTGCCCTCAACAAGCCGATGTACATAtgcatttaaaggACGTGCAGCAGATCGCGAAACCCTGCTCATTTTCTAGAGACAAGCTGAAAGATCCTGTTACGTATGCGGACTTATTATCAAGTCCAATCGTAAAGGGTGCATTacgaaatataaataaaagccatCGACGCTTCGGTGTGTCAGTA
>TU41254
ATCACAGCGCTCGTTATTAGCAGGCCAGCGGAACGAAGGTGACATTTAGCCGCTCCGCTAGCGCAGCTCATTTGATCCCAACGAGTTGCGAAAAGAGCTGCGGCATAAATACAAGCATGTCTTCCCTGAGGAGGACGACGGGTGTCCTCCGGACCGGCCTGCAGCTCCTCAGACGCGGACCTCAGCAGGTGACAGTCAGAAAGGCAGGAGGAGGCCCTCATATTGAACCCCAATACAGACAACCTCCTATTCTCACCAAGAACCAGAAGTTTCAAGCAGAGCTGCTCAGCGGCGCCATGTGGTTCTGGATCCTGTGGCACTTCTGGCACGACCCCGACGCCGTCATGGGTCATTTCCCGTGGCCGGACACTTCGGCGTGGACCGACAAGGAGCTGGGAATCCCACCTGACGATGAAGAGTAGATTTGCCCTCAACAAGCCGATACGTGCAGCAGATCGCGAAACCCTGCTCATTTTCTAGAGACAAGCTGAAAGATCCTGTTACGTATGCGGACTTATTATCAAGTCCAATCGTAAAGGGTGCATTacgaaatataaataaaagccatCGACGCTTCGGTGTGTCAGTA
>XM_043237652.1
GCGCTCGTTATTAGCAGGCCAGCGGAACGAAGGTGACATTTAGCCGCTCCGCTAGCGCAGCTCATTTGATCCCAACGAGTTGCGAAAAGAGCTGCGGCATAAATACAAGCATGTCTTCCCTGAGGAGGACGACGGGTGTCCTCCGGACCGGCCTGCAGCTCCTCAGACGCGGACCTCAGCAGGTGACAGTCAGAAAGGCAGGAGGAGGCCCTCATATTGAACCCCAATACAGACAACCTCCTATTCTCACCAAGAACCAGAAGTTTCAAGCAGAGCTGCTCAGCGGCGCCATGTGGTTCTGGATCCTGTGGCACTTCTGGCACGACCCCGACGCCGTCATGGGTCATTTCCCGTGGCCGGACACTTCGGCGTGGACCGACAAGGAGCTGGGAATCCCACCTGACGATGAAGAGTAGATTTGCCCTCAACAAGCCGATGTACATAtgcatttaaaggACGTGCAGCAGATCGCGAAACCCTGCTCATTTTCTAGAGACAAGCTGAAAGATCCTGTTACGTATGCGGACTTATTATCAAGTCCAATCGTAAAGGGTGCATTacgaaatataaataaaagccatCGACGCTT
>XM_043237654.1
GCGCTCGTTATTAGCAGGCCAGCGGAACGAAGGTGACATTTAGCCGCTCCGCTAGCGCAGCTCATTTGATCCCAACGAGTTGCGAAAAGAGCTGCGGCATAAATACAAGCATGTCTTCCCTGAGGAGGACGACGGGTGTCCTCCGGACCGGCCTGCAGCTCCTCAGACGCGGACCTCAGCAGGTGACAGTCAGAAAGGCAGGAGGAGGCCCTCATATTGAACCCCAATACAGACAACCTCCTATTCTCACCAAGAACCAGAAGTTTCAAGCAGAGCTGCTCAGCGGCGCCATGTGGTTCTGGATCCTGTGGCACTTCTGGCACGACCCCGACGCCGTCATGGGTCATTTCCCGTGGCCGGACACTTCGGCGTGGACCGACAAGGAGCTGGGAATCCCACCTGACGATGAAGAGTAGATTTGCCCTCAACAAGCCGATACGTGCAGCAGATCGCGAAACCCTGCTCATTTTCTAGAGACAAGCTGAAAGATCCTGTTACGTATGCGGACTTATTATCAAGTCCAATCGTAAAGGGTGCATTacgaaatataaataaaagccatCGACGCTT

Function

symbol description
ndufb2 Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFB2 (NADH:ubiquinone oxidoreductase subunit B2).

NR:

description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41253 True 608 TUCP 0.53 4 11689314 11691129
TU41254 False 589 TUCP 0.53 4 11689314 11691129
XM_043237652.1 False 589 mRNA 0.53 4 11689320 11691116
XM_043237654.1 False 570 mRNA 0.54 4 11689320 11691116

Neighbor

gene id symbol gene type direction distance location
lhfpl3 lhfpl3,LOC107680022,LOC107694191 coding upstream 36556 11618061 ~ 11652758 (+)
guca1a guca1a,LOC107590762,LOC107755893,LOC107590961 coding upstream 82743 11602201 ~ 11606571 (+)
llph llph,LOC107755886,LOC107590743,LOC107694185,LOC107680014 coding upstream 114077 11573747 ~ 11575237 (+)
myf6 LOC107755889,LOC107749082,LOC107694156,LOC107680015 coding upstream 362621 11324633 ~ 11326693 (+)
syt1a syt1a,LOC107560302,LOC107694178,LOC107734425,LOC107755909,LOC107590640,LOC107680026 coding upstream 532570 10998929 ~ 11156744 (+)
sema3c sema3c,LOC107694195,LOC107680038,LOC107710663,LOC107755880 coding downstream 49603 11740732 ~ 11783807 (+)
slc35e3 slc35e3,LOC107710682,LOC107737854 coding downstream 323457 12014586 ~ 12018965 (+)
mdm2 mdm2,LOC107590969,LOC107710681,LOC107692244,LOC107737846,LOC107694202 coding downstream 329492 12020621 ~ 12027468 (+)
LOC122342854 trhde,si:ch211-198g19.1,LOC107556776,LOC107666938,LOC107590972,LOC107710683,LOC107710667,LOC107669707,LOC107737852 coding downstream 382574 12073703 ~ 12147286 (+)
LOC122342787 si:ch211-198g19.1,si:ch211-149p5.1,trhde,LOC107590972,LOC107710683,LOC107556776 coding downstream 478998 12170127 ~ 12267756 (+)
G27851 NA non-coding upstream 374 11685713 ~ 11688940 (+)
G27850 NA non-coding upstream 4178 11684883 ~ 11685136 (+)
LOC122343275 NA non-coding upstream 10644 11674000 ~ 11678670 (+)
G27836 kmt2e,LOC107590817,LOC107710662 non-coding upstream 34357 11653472 ~ 11654957 (+)
G27827 NA non-coding upstream 87279 11599745 ~ 11602035 (+)
G27862 NA non-coding downstream 61539 11752668 ~ 11785852 (+)
G28077 NA non-coding downstream 294223 11985352 ~ 11986186 (+)
LOC122342766 NA non-coding downstream 298742 11989871 ~ 11991884 (+)
G28094 NA non-coding downstream 327974 12019103 ~ 12019422 (+)
G28095 NA non-coding downstream 328367 12019496 ~ 12019766 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 273087 11386130 ~ 11416227 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other upstream 354858 11331545 ~ 11334456 (+)
LOC122342850 LOC107740709 other upstream 980367 10707132 ~ 10708947 (+)
zmp:0000000650 LOC107694155,LOC107589077,LOC107732968,LOC107680013,LOC107574990 other upstream 987111 10686097 ~ 10702203 (+)
rassf8b rassf8,rassf8b,LOC107590609,LOC107589039,LOC107738830 other upstream 1014204 10662231 ~ 10675110 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other downstream 105853 11796982 ~ 11815305 (+)
kin kin,LOC102791470 other downstream 1459607 13150736 ~ 13154358 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other downstream 1614540 13305669 ~ 13315684 (+)
G28249 LOC107689220,LOC107755152 other downstream 1632159 13323288 ~ 13530631 (+)
vezt vezt,LOC107689227,LOC107667718,LOC107597031,LOC107755144 other downstream 1714800 13405929 ~ 13433606 (+)

Expression


Co-expression Network