G27836 (kmt2e,LOC107590817,LOC107710662)


Basic Information

Item Value
gene id G27836
gene name kmt2e,LOC107590817,LOC107710662
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 11653472 ~ 11654957 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41257
GGTATAAAACTGTCATTACAGTGATTTATTATAATGAACCATGAAAATAGCCAACCAGTGCTGTGTCTGTGAGCCTctgtccttcacacacacatacactcacacacaaacagtaaaaaaaaaaataaaccagagaggaagaaataaaaatagtgcTACAGTCACAGAAACATTCAGCGTTTTTGTCAAGAGCGCTTGTATTTACAACCATATTCCAAAATGGGGATGGGAGCGAATTATACAAgcatagaaaagaaaagaagccaATATTTACAACTGTTTCTGGAGAAAGCTGGAGTAACCACCTAtacattaaattacactttCTACAAATAACCATtgatattcaaaaataaaccgCTTACCCCCTACAGGAAGGACCTCTCTTTCTAAAGCTGCCACAGAGAACAGCACGCATCTGTCTGTGCCGTATTTGCCTTCCGTTTCTCGTGCGCACTTCAAACATGCGCACGGACGCGGGCGGCACGCAAGCATACACGCTCCCTTCCGCTTAAAAACAGACACTCAAGCACACAGACTCGCTCATTCACACAAGTGCAGTCTCCTGGGGCAGTGAAGCGGCCTATCAGAAAGGTCTCCTCTGAATTTCTGCAGCGGTGCACAGATATTTTTGTTACAtggaggaataaaaaaaataataattctgtactttttttctctATACAAAATCTTTTTGCTATATAATGAGCCActagataaaacaaacaacagatgAAAAACAGTGAGAAACGGGAAGAAcaggggggggaaaaaaaggtaaGGAGCAAACTGGAATGTCCCATGGCATTGCACTGCACCGGGAGGAAAGAGGGAAGGACTCAACGGGAAGAGGGcggttaaaatgaataaaaacattaaaaataaaaaaaagacgtCTGGAAAAGACAGGATGGCAGTACAAGATTATGGGAAGGAGAGAGGTGTGGGGGATTCTGGGTAAGTGATGAGCACCAGGGTTCATTAACCATCATCTTTTACACAAAGTCTACTTTTACAGTTCgcgtttatctttttttaaaatgtacccTTCCCCCCCACCGGTTTCCATTAGCCTTTGTGAAAAGGtacatagaaaatatttacagtggTGCTGTGTTGCCTATGTTACACGATGTAGCTCCACCCCTCTCTGAGTGAGTTTGTCTGGGGGGGCGGGGTTGAGTGGGTGTGGTCAGTGCCATCCTGTGCCCAAGTAGCCGGTGCTGTGAAAGGGGGCGGACGAAGGGGCAGGTCCTCGGTTACCGCCGGCGATCTGCGAGACGCTCGGGTTGGGCGGGGTCTGTGTGGGAGGAGTTTGTTGGGGAGGTGGTGGCGGAGGCGGGGGTAATACAGTTTGTTGATAAGTGGATGGGGTCACTGAGGGGTTGGCTGGTGCAGACTGGTGTAGTAGAGCGGTTTGAAAGCCACCCATGTTCTGGAACGGGTGAGGTGCGGTAGGGGAGGGAGGGGCGGAAGGGGCGGGTGT

Function

symbol description
kmt2e Predicted to enable metal ion binding activity. Is expressed in central nervous system and intermediate cell mass of mesoderm. Human ortholog(s) of this gene implicated in autistic disorder and cervical cancer. Orthologous to human KMT2E (lysine methyltransferase 2E (inactive)).

NR:

description
PREDICTED: histone-lysine N-methyltransferase 2E-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41257 True 1486 lncRNA 0.46 1 11653472 11654957

Neighbor

gene id symbol gene type direction distance location
lhfpl3 lhfpl3,LOC107680022,LOC107694191 coding upstream 714 11618061 ~ 11652758 (+)
guca1a guca1a,LOC107590762,LOC107755893,LOC107590961 coding upstream 46901 11602201 ~ 11606571 (+)
llph llph,LOC107755886,LOC107590743,LOC107694185,LOC107680014 coding upstream 78235 11573747 ~ 11575237 (+)
myf6 LOC107755889,LOC107749082,LOC107694156,LOC107680015 coding upstream 326779 11324633 ~ 11326693 (+)
syt1a syt1a,LOC107560302,LOC107694178,LOC107734425,LOC107755909,LOC107590640,LOC107680026 coding upstream 496728 10998929 ~ 11156744 (+)
sema3c sema3c,LOC107694195,LOC107680038,LOC107710663,LOC107755880 coding downstream 85775 11740732 ~ 11783807 (+)
slc35e3 slc35e3,LOC107710682,LOC107737854 coding downstream 359629 12014586 ~ 12018965 (+)
mdm2 mdm2,LOC107590969,LOC107710681,LOC107692244,LOC107737846,LOC107694202 coding downstream 365664 12020621 ~ 12027468 (+)
LOC122342854 trhde,si:ch211-198g19.1,LOC107556776,LOC107666938,LOC107590972,LOC107710683,LOC107710667,LOC107669707,LOC107737852 coding downstream 418746 12073703 ~ 12147286 (+)
LOC122342787 si:ch211-198g19.1,si:ch211-149p5.1,trhde,LOC107590972,LOC107710683,LOC107556776 coding downstream 515170 12170127 ~ 12267756 (+)
G27827 NA non-coding upstream 51437 11599745 ~ 11602035 (+)
G27826 NA non-coding upstream 55157 11597872 ~ 11598315 (+)
G27825 NA non-coding upstream 55769 11597295 ~ 11597703 (+)
G27805 LOC107590700,LOC107590977,LOC107694182,LOC107755902 non-coding upstream 208756 11443224 ~ 11444716 (+)
G27801 NA non-coding upstream 219141 11429962 ~ 11434331 (+)
LOC122343275 NA non-coding downstream 19043 11674000 ~ 11678670 (+)
G27850 NA non-coding downstream 29926 11684883 ~ 11685136 (+)
G27851 NA non-coding downstream 30756 11685713 ~ 11688940 (+)
G27862 NA non-coding downstream 97711 11752668 ~ 11785852 (+)
G28077 NA non-coding downstream 330395 11985352 ~ 11986186 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 237245 11386130 ~ 11416227 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other upstream 319016 11331545 ~ 11334456 (+)
LOC122342850 LOC107740709 other upstream 944525 10707132 ~ 10708947 (+)
zmp:0000000650 LOC107694155,LOC107589077,LOC107732968,LOC107680013,LOC107574990 other upstream 951269 10686097 ~ 10702203 (+)
rassf8b rassf8,rassf8b,LOC107590609,LOC107589039,LOC107738830 other upstream 978362 10662231 ~ 10675110 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other downstream 34357 11689314 ~ 11691129 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other downstream 142025 11796982 ~ 11815305 (+)
kin kin,LOC102791470 other downstream 1495779 13150736 ~ 13154358 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other downstream 1650712 13305669 ~ 13315684 (+)
G28249 LOC107689220,LOC107755152 other downstream 1668331 13323288 ~ 13530631 (+)

Expression


Co-expression Network