G27883


Basic Information

Item Value
gene id G27883
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10389447 ~ 10389805 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41330
CCTGACCTCCGTGACTCCAGTAATGTAAGAAGCACTTGCGTTCCATTGACGACAGACGCTTCAGTCCTTTCCCCTTCAAACATGTTCTTCAAAAGCTCCGCCACATTCTCTTGTCTACAAAGTCGACTCCAGGACAGCCAGTAAAGGGTCTGGTTCGGTGACCTCTGACAGCTGATTACCCTGGTCTCGACTAAGTCGAATGATGTCACACAGAGTCTGGGATGCATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41330 True 230 lncRNA 0.50 2 10389447 10389805

Neighbor

gene id symbol gene type direction distance location
dennd6b dennd6b,LOC107738816,LOC107590515,LOC107694164,LOC107732989,LOC107557304 coding downstream 7732 10373628 ~ 10381715 (-)
atp6v1f atp6v1f,LOC107590479,LOC101079638,LOC107557307,LOC106511462 coding downstream 23863 10364105 ~ 10365584 (-)
drd4-rs drd4-rs,LOC107591318,LOC107738833,LOC107557292,LOC107732971,LOC107699035,LOC108432516 coding downstream 69274 10301342 ~ 10320173 (-)
cdhr5-rs LOC107699064,LOC107590451,LOC107733013,LOC107738811,LOC107557309 coding downstream 98574 10275513 ~ 10290873 (-)
cacna2d1a LOC107738810,LOC107732991,LOC107699066,LOC107590440 coding downstream 125101 10201993 ~ 10264346 (-)
fam3c fam3c,LOC107738818,LOC107694166,LOC107699057,LOC107733009 coding upstream 8286 10398091 ~ 10403758 (-)
si:dkey-159a18.1 LOC107694153,LOC107591329,LOC107738834,LOC107699055 coding upstream 14794 10404599 ~ 10413735 (-)
cep83 LOC107694167,LOC107738819,LOC107591083,LOC107699054 coding upstream 24390 10414195 ~ 10421161 (-)
lrrc17 lrrc17,LOC107738820,LOC107694168,LOC107591338,LOC107699038,LOC107557290 coding upstream 34127 10423932 ~ 10433495 (-)
LOC122342631 NA coding upstream 56840 10446645 ~ 10448364 (-)
LOC122343524 NA non-coding downstream 40156 10322734 ~ 10349291 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding downstream 251391 10083419 ~ 10138056 (-)
G27627 NA non-coding downstream 373693 10015182 ~ 10015754 (-)
G27581 NA non-coding downstream 644660 9697696 ~ 9744787 (-)
G27549 NA non-coding downstream 735070 9597457 ~ 9654377 (-)
G27894 lrtm2a,lrtm2,LOC107738823,LOC107590570,LOC107694175,LOC107732983 non-coding upstream 56630 10446435 ~ 10562772 (-)
G27910 NA non-coding upstream 260093 10649898 ~ 10659974 (-)
G27940 NA non-coding upstream 324825 10714630 ~ 10720284 (-)
LOC122342624 LOC107694146 non-coding upstream 540792 10930597 ~ 10932401 (-)
G27974 syt1a,LOC107590640,LOC107694178,LOC107734425 non-coding upstream 736697 11126502 ~ 11259483 (-)
zgc:193726 NA other downstream 25881 10355711 ~ 10363566 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 1089268 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 1380143 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 1448044 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 1514849 8870215 ~ 8874598 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 95117 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 134726 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 1024915 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 1263665 11653470 ~ 11683862 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 1452160 11841965 ~ 11996639 (-)

Expression


Co-expression Network