G28029


Basic Information

Item Value
gene id G28029
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 11685732 ~ 11688800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41551
TCTGCATTTCTATTAATCATTCAATCACCTATTAGTCTTTAAATGCTATCATctaagaaaatattatataaataacataaggGCTGGAAGAAACTAGGAGCGTCAGCagaataacataaataaacacaactaATGTGATgtcaattataaataaataccagcTGTGTAAAGAGTGAGGAATAATGTTAACAGGTTATCAGGCTATATCTTTACTCCCGCCTACTCTAGTCTTAGGTGAAAATGTTAGTCTGAggtgtttcaactgaaagaaacttgcacagATTGATCTTAAGATATATCAGggcctttgttttgttttgttcataaatcctggtttaggctaagaCCGGTCTATGAAACCAGGCCTCGGCATCTTAACCCTTCAAACACCGACTTCAAAATCAAATAAGATAAtcagaatataatttttaattgtaacttaTTGCAGTAGTTTACTGAACCTCTTTATTACGTCTCGTATTGTCACACGTGAcacattgtgttttaaatatccAATAAGACCAGGGGCTGCATGCATAAAGCTGCTCAGATCATAATGTCTCTCTTCAGTCAAAATTGATTTTGCTGCTTGGCTCTTTCAGACTTTTAGCGTCTTTGTAGTAGTCTCCTACTTTTAGATTGAGCCACCATTCAAGCTATGAATGTGATTTTGAATACAGTGCATGTTTACATCTTGACAAAGACACTGGTTTTATCATCAGTCGGTCAAAGATTCTCTCAGTTGAAACGGCTCACACATAAATTTTAGCCTACATTCGAAACCAGGGAATAGAGCATGATATAAATGGATACGGTGCTCATAATTaagatgaaaaacacacacgtcCTGCTCAGGTCCACAGAGCAAACGTATGCAGCTTGGTGCAAACGAAACGTGAATCAATAACATTACAGCAGACTACTTATGCGTATAAATATCAATAACGGCTTGGTAAAGACTTAAATTCAGACAGAGGTAGTAAAAGACtgaagaacagtttttttttttttttttcacacactgtTGGTCATTTACAGGCCTTAGAAGTTGTACACAGCATGCTTTACAGGTTAAGTTTGGTTATTTCAATACAATTTCCCCCCCTACCAATTTGGTTGTTTGAGcccctgatttaaaaaaacgctaacaataataataaagctgtAACGTTGCAATATGGAATAAGACAACTGGATAACATAAGCATACTCTGCTAATaagtttaaacaaatattagGAGCGAAATTGCTCGGGCATCGATTTAAAACAGGCATTTTGGAGACGACAAAGCGACAGCGACTCCCTCAGCGGAGGGCTCGATAGAAAGCGCTCCAATACGCCATTTACTAATCCCCGTCCCGGAGCGGCGCGGAGGAGGCGGCCAGGGAGCGACAACATGGCGGCGGCTCTGGAAACACGGTCGACGGAGGAGCCGCGGCGGTACTTAACGGCGAGCGGGGCGGCTCGGACGGGAAACCTCGGCAGGGACGTTTTCCAAACGCGACTCGCTTCCTGGCCGCCACCGAAACAGGAAGCGCGCTCCTTCGGCGCGAGCCTTTTGTTGCGGCTCGTATGCGGCTATTGTGACGTAACACAGGATCGTCTCTTTGGTGAAGCTTgacctttataaaaaaaaaaaaaatccccaaaacacACACGACTGAACGAACGCGACCGCACTGCGTGgccgatttatttatttcaccaaAAACCATCAAGACCGCGTAGACATGGTAATAGCATTGCTaaaaaacttcatttggacgaCTTTTAAGgcgattaaattttttttggacTCAAATGCTATCCCTTCCTAACATCAGCGGAACGTTTATCGATTTCAGACGAAGTAAAatctcaataaattaaataaagaccGGCCACatgctttcaatgagtttagCCGACGATAGTTTTATTAACAATCATATGTAACGGAGTTGACTTAAATAGAactttactattattataatgatttcattTAACCGCAATGTATTTTCATTACAACAcgatactgcaaaaaaaataaaaaataaatacgtgtTGCTCGTGAGCAAAGCCTGTAATAAACAGCCCTGTATGCCTTTGTGATGTCTTAATTTATGCCCGTAATTTGTCACGTCACCCTGTCAGGGGCCACGTCATTACGTCACGACGCAGGAGAAAAAGAATCACCGAATCGTTTATAACCGGATCTTTAAAAAAGAACCGAAAGAATGTCCGAAACGCTGCATTTATACTCCGGTGTGTGAGGCGACGAAAGCACGTCAAGGTGCATTTTAAAACGCTCGGCTGATGATGATGTGACGTTACTCTTACAGAGCCGAATCCGGTTTTCGGCGACGGTATTTTCTGGAAAGCCCGTGACCCCGCCCAGTGCGCGCTTTGTGCAGTGCTGCGTGGACGCCATCTTCCTgcgatttatttttgttttgtgacgCGAGCTAATTTAGCGTGTAAAACAACTCCGCGGGAAAAAAACGCCGTGTTTCAGAGATCCGCTGAGATTAGAGTAAACGAAACGGTTAACGGGAGTTGGAGTTAAAGGCGCCCTACTGTCTTCCACAAACAAACGCGCTCGGATCTCCGGTTGCGCCGCTCTCCCCTCGCAGCTCAGAGCCCGCCCACATGTGGAATTCAGATGATGTCATCTGTAGCCAATCAGCGTCGTGAAATCAGGACAATGCGCGTATTATTGGTCAAGGGCAATGCCATTCATTCTATTCAGGAAGACCGGGAAGGGGGGTGAGCGGAGAAAATCGCCATTTTGAAAGCGTAACAAAATGAGCGATATCGACGCTGAAATAACACCCTAGCTCCACAACTGGTTGAAATGTAGCCCGTCTTTATGTCCGGTCTATAATCTCACGCGTCCCGAGAGTGAAAACCTGAAGATGATTTGACTTGGCGTAGCAGGCAATCCCGTGCGACACAACGGCTCGATTTAACTATCTCTTTAGTTTCGTGTCCCTCTCAACTGGGCAAACTCGACGGTCGGCGCGCCACATCGCAGTTTTCTGCTTTGTCTTGCCGTGTTTCTCCACTCTGCGTTGCATAGCTCTTCAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41551 True 3069 lncRNA 0.43 1 11685732 11688800

Neighbor

gene id symbol gene type direction distance location
orc5 orc5 coding downstream 68243 11607310 ~ 11617489 (-)
golgb1 golgb1,LOC107694188,LOC107755883,LOC107590726,LOC107710669,LOC107590960 coding downstream 83710 11582762 ~ 11602022 (-)
hcls1 hcls1,LOC107755885,LOC107694186,LOC107710670,LOC107680042,LOC105023407,LOC103459100 coding downstream 103429 11575175 ~ 11582303 (-)
lin7a lin7a,LOC107755905,LOC107590687 coding downstream 309470 11338341 ~ 11376262 (-)
rps16 rps16,LOC107590675,LOC103382554 coding downstream 387494 11296296 ~ 11298238 (-)
kdm7aa LOC107694190,LOC107590789,LOC107710674,LOC107590966,LOC107680036 coding upstream 2322 11691122 ~ 11710502 (-)
cd36 cd36,LOC107590984,LOC107680017,LOC107694198 coding upstream 96546 11785346 ~ 11792920 (-)
nup107 nup107,LOC107590859,LOC107710680,LOC107694200,LOC107680040 coding upstream 141957 11830757 ~ 11840052 (-)
LOC122343504 si:ch211-198g19.1,si:ch211-149p5.1,trhde,LOC107590972,LOC107556777,LOC107710683,LOC107556776 coding upstream 590841 12279641 ~ 12371170 (-)
LOC122343505 trhde,si:ch211-149p5.1,si:ch211-198g19.1,LOC107556776,LOC107666938,LOC107590972,LOC107710683,LOC107710667,LOC107669707 coding upstream 724986 12413786 ~ 12430886 (-)
LOC122343274 NA non-coding downstream 37309 11618450 ~ 11648423 (-)
G27974 syt1a,LOC107590640,LOC107694178,LOC107734425 non-coding downstream 426249 11126502 ~ 11259483 (-)
LOC122342624 LOC107694146 non-coding downstream 753331 10930597 ~ 10932401 (-)
G27940 NA non-coding downstream 965448 10714630 ~ 10720284 (-)
G27910 NA non-coding downstream 1025758 10649898 ~ 10659974 (-)
G27987 sema3c,LOC107710663,LOC107755880,LOC107680038,LOC107694195 non-coding upstream 92159 11780959 ~ 11804910 (-)
LOC122342677 NA non-coding upstream 105483 11794283 ~ 11820297 (-)
G28033 NA non-coding upstream 109766 11798566 ~ 11815305 (-)
G28090 NA non-coding upstream 308213 11997013 ~ 11997303 (-)
G28086 NA non-coding upstream 329809 12018609 ~ 12019001 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other downstream 1870 11653470 ~ 11683862 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other downstream 111966 11414720 ~ 11573766 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other downstream 1152189 10524531 ~ 10533543 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other downstream 1163483 10484922 ~ 10522249 (-)
zgc:193726 NA other downstream 1322166 10355711 ~ 10363566 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 153165 11841965 ~ 11996639 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other upstream 325831 12014631 ~ 12015767 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other upstream 776812 12465612 ~ 12489181 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other upstream 1488161 13176961 ~ 13186890 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other upstream 1628132 13316932 ~ 13361938 (-)

Expression


Co-expression Network