G28094


Basic Information

Item Value
gene id G28094
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 12019103 ~ 12019422 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41651
CTGCCAGCaagttataaatacatttatattaatatattctagcattaaaatgttttgtttcagtaaaTGTAGGCCTAATAAAAAACTTCCAAGGCTGcctttaatgcaaaattatataaaagtagtaatattgtgaaacaatctaaaaatataaaatgacttctttgcatttgaatatatttgatattttgaatTCCTGTGAtaccaaagctgaattttcagcagccatcagaaatatttcaaattattgtCAATGTAGAGATACTTCTTAATATTTGTATAGAAACAGTGATTAACTTTTTCAGGGATCTTTGATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41651 True 320 lncRNA 0.26 1 12019103 12019422

Neighbor

gene id symbol gene type direction distance location
slc35e3 slc35e3,LOC107710682,LOC107737854 coding upstream 138 12014586 ~ 12018965 (+)
sema3c sema3c,LOC107694195,LOC107680038,LOC107710663,LOC107755880 coding upstream 235296 11740732 ~ 11783807 (+)
lhfpl3 lhfpl3,LOC107680022,LOC107694191 coding upstream 366345 11618061 ~ 11652758 (+)
guca1a guca1a,LOC107590762,LOC107755893,LOC107590961 coding upstream 412532 11602201 ~ 11606571 (+)
llph llph,LOC107755886,LOC107590743,LOC107694185,LOC107680014 coding upstream 443866 11573747 ~ 11575237 (+)
mdm2 mdm2,LOC107590969,LOC107710681,LOC107692244,LOC107737846,LOC107694202 coding downstream 1199 12020621 ~ 12027468 (+)
LOC122342854 trhde,si:ch211-198g19.1,LOC107556776,LOC107666938,LOC107590972,LOC107710683,LOC107710667,LOC107669707,LOC107737852 coding downstream 54281 12073703 ~ 12147286 (+)
LOC122342787 si:ch211-198g19.1,si:ch211-149p5.1,trhde,LOC107590972,LOC107710683,LOC107556776 coding downstream 150705 12170127 ~ 12267756 (+)
itih5 itih5,LOC107675976,LOC107555826 coding downstream 1146318 13165740 ~ 13175798 (+)
sfmbt2 sfmbt2,LOC107675978 coding downstream 1171182 13190604 ~ 13227324 (+)
LOC122342766 NA non-coding upstream 27219 11989871 ~ 11991884 (+)
G28077 NA non-coding upstream 32917 11985352 ~ 11986186 (+)
G27862 NA non-coding upstream 233251 11752668 ~ 11785852 (+)
G27851 NA non-coding upstream 330163 11685713 ~ 11688940 (+)
G27850 NA non-coding upstream 333967 11684883 ~ 11685136 (+)
G28095 NA non-coding downstream 74 12019496 ~ 12019766 (+)
G28104 NA non-coding downstream 128716 12148138 ~ 12155255 (+)
LOC122343506 NA non-coding downstream 318523 12337945 ~ 12340101 (+)
LOC122342723 NA non-coding downstream 441264 12460686 ~ 12462227 (+)
G28209 gata3 non-coding downstream 1011615 13031037 ~ 13144904 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other upstream 203798 11796982 ~ 11815305 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other upstream 327974 11689314 ~ 11691129 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 602876 11386130 ~ 11416227 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other upstream 684647 11331545 ~ 11334456 (+)
LOC122342850 LOC107740709 other upstream 1310156 10707132 ~ 10708947 (+)
kin kin,LOC102791470 other downstream 1131314 13150736 ~ 13154358 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other downstream 1286247 13305669 ~ 13315684 (+)
G28249 LOC107689220,LOC107755152 other downstream 1303866 13323288 ~ 13530631 (+)
vezt vezt,LOC107689227,LOC107667718,LOC107597031,LOC107755144 other downstream 1386507 13405929 ~ 13433606 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other downstream 1863472 13882894 ~ 13961098 (+)

Expression


Co-expression Network