G28233


Basic Information

Item Value
gene id G28233
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13176963 ~ 13177977 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41854
AAGTCGCTCAAACTCTGGTTATATTAGTTTTCATCAAAATAAGGCATCAAGTCAACATTTTCCAACAAGACGCTTCTTTATGTTGAAGAAATGGCATGTGCGCGTTGACATTGCTACAATTTTGAAGAAAGCAATATAATTTAACAGCtgaaatttaaaagtttacaCCACGCTGTACATTTCataaatcagtttgtttttcagaacgtacaaaaacaatcataaaaaaacGACGCAACGTTCAAACGAAGATGATCTGCTCTTTCGCTTAATACTGAATATTTACAAATCGTTTAactaagcttttttttctcGAGCGCATCtttcacaaatgaaatattCGAGCGCGCCTCAGAGCTGGAAACAAGGATGTAGTGTATTTACCGCGAGGTGTTCATCACAGGTAGCGGCATGACTTGCTTAGACTACAAATTAAAAGTCTCAAAGTCTGTAATCAGGAGAGACGCTAGACctcctctctcatctctctgCTTTTAATTAACTTCTTAGAAGTAGGAACTCTAAAGGACGTAGGAGGAGGATAATGTTTCCCTTTAATAACTCATAGGCTCAGAACAATCTGCTTAAACGTTAAAATAcgaacatatatacatacaaccTACAATGTAACTTCAATTTAAACTGTTGCTCTTATTGAGcaattttttaagatttaaggttaaagtttacttaaatgtataaaagaaaaaaggatatCTTAGATGCTGTAACTTGTCGAACGGTGACCACTTTCTAtcatttttgattcactaaTTTTAAAAGTCTGATATGAATTTTTCCAGATATGAATCTCATTTCAAATACGGTGCACGCATAACAATAAAAGTATAAGCTCAAAATCTGGAGATCTGCCTGTTGAGACGCCATTGTCCTTCTAACAATTGCTCTCAAAATGTTTTGGGAATATATCGTCATGGTAATGGTAACATAATTGAATACTGAATACACaattgacttatttttttaaattactgttGAAATGTCAACAAAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41854 True 1015 lncRNA 0.34 1 13176963 13177977

Neighbor

gene id symbol gene type direction distance location
itih5 itih5,LOC107675976,LOC107555826 coding upstream 1165 13165740 ~ 13175798 (+)
LOC122342787 si:ch211-198g19.1,si:ch211-149p5.1,trhde,LOC107590972,LOC107710683,LOC107556776 coding upstream 909207 12170127 ~ 12267756 (+)
LOC122342854 trhde,si:ch211-198g19.1,LOC107556776,LOC107666938,LOC107590972,LOC107710683,LOC107710667,LOC107669707,LOC107737852 coding upstream 1029677 12073703 ~ 12147286 (+)
mdm2 mdm2,LOC107590969,LOC107710681,LOC107692244,LOC107737846,LOC107694202 coding upstream 1149495 12020621 ~ 12027468 (+)
slc35e3 slc35e3,LOC107710682,LOC107737854 coding upstream 1157998 12014586 ~ 12018965 (+)
sfmbt2 sfmbt2,LOC107675978 coding downstream 12627 13190604 ~ 13227324 (+)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 coding downstream 60237 13238214 ~ 13254897 (+)
il15ra NA coding downstream 115011 13292988 ~ 13301954 (+)
LOC122342559 si:dkey-183c16.7,LOC107689220,LOC107755152 coding downstream 127767 13305744 ~ 13325959 (+)
LOC122342560 si:dkey-183c16.7,LOC107689220,LOC107755152 coding downstream 128376 13306353 ~ 13310418 (+)
G28210 NA non-coding upstream 15120 13161295 ~ 13161843 (+)
G28231 NA non-coding upstream 28256 13146387 ~ 13148707 (+)
G28209 gata3 non-coding upstream 32059 13031037 ~ 13144904 (+)
G28221 NA non-coding upstream 74063 13102322 ~ 13102900 (+)
LOC122342723 NA non-coding upstream 714736 12460686 ~ 12462227 (+)
G28246 NA non-coding downstream 11519 13189496 ~ 13189767 (+)
G28254 NA non-coding downstream 50404 13228381 ~ 13228601 (+)
G28255 NA non-coding downstream 52185 13230162 ~ 13230554 (+)
G28256 NA non-coding downstream 53687 13231664 ~ 13231983 (+)
G28248 NA non-coding downstream 69792 13247769 ~ 13373966 (+)
kin kin,LOC102791470 other upstream 22605 13150736 ~ 13154358 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other upstream 1361658 11796982 ~ 11815305 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other upstream 1485834 11689314 ~ 11691129 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 1760736 11386130 ~ 11416227 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other upstream 1842507 11331545 ~ 11334456 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other downstream 127692 13305669 ~ 13315684 (+)
G28249 LOC107689220,LOC107755152 other downstream 145311 13323288 ~ 13530631 (+)
vezt vezt,LOC107689227,LOC107667718,LOC107597031,LOC107755144 other downstream 227952 13405929 ~ 13433606 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other downstream 704917 13882894 ~ 13961098 (+)
trmu trmu other downstream 807540 13985517 ~ 13991772 (+)

Expression


Co-expression Network