G28249 (LOC107689220,LOC107755152)


Basic Information

Item Value
gene id G28249
gene name LOC107689220,LOC107755152
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13323288 ~ 13530631 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41881
CAGGAGTGCTGGACCTATGGGGAGGAGGTGGTGGTTTGGTTGAGTATCGTTCTGGCTTGCTTGCATCTCACGGCTTTGCCTCCATGGCACTTGAATACCTCGCTCCAGAAGAGCTGAGAACAGCTGATGTCGATGTGTCATACTTTGAGAAAGCATACCAGATCCTGCAGAATCATCCGAAGGTACAGAGGGACCGTGTGGCAATGCTTGGACTGTCTTTTGGAAGTGCCATCACACTCAGTATGGCAGCCTACTCCAAAGTCATCGAGCTCCGGTGCTGTGTGTGTATCAGCGGAAGTCACATGTGTCCTGTAGATAAATCCATCTTTGAAGTCTTTGAGGAAATTAGAAAGTATAGAAATAGGGTACGTGTGAATGAAGAGAACCAGGTAATATACAGAGACATCATCTTGCCCATTCCCTCAGACCCAGCTCTCAAAGTGGATGTTGGGAGAATAAAGTGTCCTCTTTTGTTGGTGAATGCTGATGATGATCAGAACTGGGCTTCTGTTGAATCTGCTGAAGATATGGAGATGATGATGGAGAAAGCAGGAAATCGACACCTGTTGACGGCCCTGACGTATCCTGGCGCAGGTCATCTGATCGAACCTCCGTACTCTCCTCACGTCAGAGCATCCAACTACATCCTGCAGGATATGAAGGAGAAgaTTGTCATGCTGTGGGGTGGACAGACGAAACCACACGCATACGCTCAAGAGGACGCATGGGAGAAGATTGTCATGCTGTGGGGTGGA

Function

NR:

description
PREDICTED: bile acid-CoA:amino acid N-acyltransferase-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41881 True 755 TUCP 0.49 8 13323288 13530631

Neighbor

gene id symbol gene type direction distance location
LOC122342558 LOC107689220,LOC107755152 coding upstream 5218 13313892 ~ 13318070 (+)
LOC122342560 si:dkey-183c16.7,LOC107689220,LOC107755152 coding upstream 12870 13306353 ~ 13310418 (+)
il15ra NA coding upstream 21334 13292988 ~ 13301954 (+)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 coding upstream 68391 13238214 ~ 13254897 (+)
sfmbt2 sfmbt2,LOC107675978 coding upstream 95964 13190604 ~ 13227324 (+)
iqsec3a iqsec3,iqsec3a,LOC107689235,LOC107748472,LOC107689713,LOC107584743 coding downstream 4493 13535124 ~ 13632058 (+)
LOC122343497 parp11,LOC107726831,LOC107689238,LOC107597042,LOC107748476,LOC107584716,LOC108280019 coding downstream 135028 13665659 ~ 13669633 (+)
LOC122343498 LOC107726847,LOC107689239,LOC107597006 coding downstream 139142 13669773 ~ 13673709 (+)
LOC122343279 LOC107689243,LOC107689721,LOC107716183,LOC106575984,LOC108427068 coding downstream 259013 13789644 ~ 13827064 (+)
LOC122343278 LOC107689245,LOC107689723,LOC107566844,LOC105891163,LOC106575983,LOC106609116 coding downstream 301501 13832132 ~ 13842547 (+)
G28267 NA non-coding upstream 2172 13312934 ~ 13321116 (+)
G28256 NA non-coding upstream 91305 13231664 ~ 13231983 (+)
G28255 NA non-coding upstream 92734 13230162 ~ 13230554 (+)
G28254 NA non-coding upstream 94687 13228381 ~ 13228601 (+)
G28246 NA non-coding upstream 133521 13189496 ~ 13189767 (+)
G28446 NA non-coding downstream 227336 13757967 ~ 13760112 (+)
G28486 NA non-coding downstream 297394 13828025 ~ 13828537 (+)
G28503 NA non-coding downstream 461392 13992023 ~ 13992831 (+)
G28667 NA non-coding downstream 1277966 14808597 ~ 14809661 (+)
G28726 NA non-coding downstream 1303999 14834630 ~ 14854751 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other upstream 7604 13305669 ~ 13315684 (+)
kin kin,LOC102791470 other upstream 168930 13150736 ~ 13154358 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other upstream 1507983 11796982 ~ 11815305 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other upstream 1632159 11689314 ~ 11691129 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 1907061 11386130 ~ 11416227 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other downstream 352263 13882894 ~ 13961098 (+)
trmu trmu other downstream 454886 13985517 ~ 13991772 (+)
tbc1d22a tbc1d22a,LOC107689730,LOC107710738 other downstream 646799 14177430 ~ 14294618 (+)
tafa5a fam19a5a,fam19a5,LOC107552289,LOC107689731,LOC107563619,LOC107721159,LOC106609108,LOC103356475 other downstream 869398 14400029 ~ 14482821 (+)
LOC122343376 LOC107699368,LOC107601007,LOC107733210,LOC105896948,LOC104933464 other downstream 1627124 15157755 ~ 15214432 (+)

Expression


Co-expression Network