G28267


Basic Information

Item Value
gene id G28267
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13312934 ~ 13321116 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41906
CTCACGGTTCCTCGCTAGCAAATATATTCCAAAACATTCGCCAGATTCAATAACCTTTGTGTGTAACCTCCTATGTTCTCACCTCAAATGACTAGAAACATTGAGAGGCCTCGGTTTTGGATTGCTCTAACTGCTCCGGCGAGTCCATGCAGTAGACCCTGTGGAGCTTTTCCTTCCCCTTGGCAGTCAGATGTGGTGGAGCATCTGGCACCATGTTCTCACTCAGTAAATCCGTAAGAACTGGTAGAGAGCAGGGGTCCACATGTAGTGACCTAAGCAGATCCTGTGTGTACTGTCCACAGTATAGCCTCAGAGCCCATGTTTTCCCAGCAGACTTTCTGCTATCTTTTATGAGGTCTACAATCACCTGTAATCTTCCATATGCGCCTATACAGTTGTCCATATGGTCAGATGCTGTACCACTACTGAGTGACCGGGTTACCAATATgcattggcttttttttgtttagactCAAAGTGGACTGGTCTCCCTACACTGCAAAAACGTTTAAggtttaaacttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41906 True 525 lncRNA 0.45 2 13312934 13321116

Neighbor

gene id symbol gene type direction distance location
LOC122342560 si:dkey-183c16.7,LOC107689220,LOC107755152 coding upstream 2516 13306353 ~ 13310418 (+)
il15ra NA coding upstream 10980 13292988 ~ 13301954 (+)
prkcq prkcq,LOC107748461,LOC107675981,LOC107555829 coding upstream 58037 13238214 ~ 13254897 (+)
sfmbt2 sfmbt2,LOC107675978 coding upstream 85610 13190604 ~ 13227324 (+)
itih5 itih5,LOC107675976,LOC107555826 coding upstream 137136 13165740 ~ 13175798 (+)
lamb1b lamb1b,LOC107755155,LOC107689224 coding downstream 5249 13326365 ~ 13345061 (+)
metap2a metap2a,LOC107689230,LOC107597011,LOC107755160,LOC106576295,LOC100194705 coding downstream 102122 13423238 ~ 13432687 (+)
depdc4 si:ch211-265o23.1,LOC107755163,LOC107689232,LOC107597010 coding downstream 119520 13440636 ~ 13446821 (+)
scyl2 scyl2,si:ch211-244b2.1,LOC107755162 coding downstream 125841 13446957 ~ 13458895 (+)
tnni1d tnni1d,LOC107597014,LOC108280151,LOC103374597 coding downstream 176624 13497740 ~ 13501524 (+)
G28256 NA non-coding upstream 80951 13231664 ~ 13231983 (+)
G28255 NA non-coding upstream 82380 13230162 ~ 13230554 (+)
G28254 NA non-coding upstream 84333 13228381 ~ 13228601 (+)
G28246 NA non-coding upstream 123167 13189496 ~ 13189767 (+)
G28233 NA non-coding upstream 134957 13176963 ~ 13177977 (+)
G28295 NA non-coding downstream 116820 13437936 ~ 13440022 (+)
G28298 NA non-coding downstream 146288 13467404 ~ 13470135 (+)
G28312 NA non-coding downstream 189740 13510856 ~ 13513593 (+)
LOC122343375 NA non-coding downstream 195514 13516630 ~ 13520457 (+)
G28446 NA non-coding downstream 436851 13757967 ~ 13760112 (+)
kin kin,LOC102791470 other upstream 158576 13150736 ~ 13154358 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other upstream 1497629 11796982 ~ 11815305 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other upstream 1621805 11689314 ~ 11691129 (+)
acss3 acss3,LOC107694183,LOC107755903,LOC107680029,LOC107749070,LOC107560301,LOC107590709 other upstream 1896707 11386130 ~ 11416227 (+)
myf5 LOC107560306,LOC107680018,LOC107749081 other upstream 1978478 11331545 ~ 11334456 (+)
G28249 LOC107689220,LOC107755152 other downstream 2172 13323288 ~ 13530631 (+)
vezt vezt,LOC107689227,LOC107667718,LOC107597031,LOC107755144 other downstream 84813 13405929 ~ 13433606 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other downstream 561778 13882894 ~ 13961098 (+)
trmu trmu other downstream 664401 13985517 ~ 13991772 (+)
tbc1d22a tbc1d22a,LOC107689730,LOC107710738 other downstream 856314 14177430 ~ 14294618 (+)

Expression


Co-expression Network