G28295


Basic Information

Item Value
gene id G28295
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13437936 ~ 13440022 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU41946
TTAAAGTGCTGAAGCGCATGTTCTTCTATGTAGCGTCCGCACGCTACATGTGAACAGCTGAGACATGCCCACACCGACTCTGTGGTGTTGCAGTCCACACAGTGCCATTTCTGCGGGTTCAGGATCGAGTGGTCTTGCGCGAGCCTTAAGCGACCCACGTGCTTACACCTGTCCATCACAGTTAGTCACTGCCCTCTTCACATCGCCATGGTGACGGCAGCCAGCAGTGAAACCAGCTCCTCCCAAGGCATGATGGTTAATCTGgatttttttttcgtcAAGCACTGGCTACTCCTGTGGCACAACAGCGAGCGCCATCTTGTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41946 True 327 lncRNA 0.53 2 13437936 13440022

Neighbor

gene id symbol gene type direction distance location
metap2a metap2a,LOC107689230,LOC107597011,LOC107755160,LOC106576295,LOC100194705 coding upstream 5249 13423238 ~ 13432687 (+)
lamb1b lamb1b,LOC107755155,LOC107689224 coding upstream 92875 13326365 ~ 13345061 (+)
LOC122342559 si:dkey-183c16.7,LOC107689220,LOC107755152 coding upstream 111977 13305744 ~ 13325959 (+)
LOC122342558 LOC107689220,LOC107755152 coding upstream 119866 13313892 ~ 13318070 (+)
LOC122342560 si:dkey-183c16.7,LOC107689220,LOC107755152 coding upstream 127518 13306353 ~ 13310418 (+)
depdc4 si:ch211-265o23.1,LOC107755163,LOC107689232,LOC107597010 coding downstream 614 13440636 ~ 13446821 (+)
scyl2 scyl2,si:ch211-244b2.1,LOC107755162 coding downstream 6935 13446957 ~ 13458895 (+)
tnni1d tnni1d,LOC107597014,LOC108280151,LOC103374597 coding downstream 57718 13497740 ~ 13501524 (+)
LOC122342856 LOC107689257,LOC107726829 coding downstream 83928 13523950 ~ 13530743 (+)
iqsec3a iqsec3,iqsec3a,LOC107689235,LOC107748472,LOC107689713,LOC107584743 coding downstream 95102 13535124 ~ 13632058 (+)
G28248 NA non-coding upstream 63970 13247769 ~ 13373966 (+)
G28267 NA non-coding upstream 116820 13312934 ~ 13321116 (+)
G28256 NA non-coding upstream 205953 13231664 ~ 13231983 (+)
G28255 NA non-coding upstream 207382 13230162 ~ 13230554 (+)
G28254 NA non-coding upstream 209335 13228381 ~ 13228601 (+)
G28298 NA non-coding downstream 27382 13467404 ~ 13470135 (+)
G28312 NA non-coding downstream 70834 13510856 ~ 13513593 (+)
LOC122343375 NA non-coding downstream 76608 13516630 ~ 13520457 (+)
G28446 NA non-coding downstream 317945 13757967 ~ 13760112 (+)
G28486 NA non-coding downstream 388003 13828025 ~ 13828537 (+)
vezt vezt,LOC107689227,LOC107667718,LOC107597031,LOC107755144 other upstream 4330 13405929 ~ 13433606 (+)
G28252 si:dkey-183c16.7,LOC107689220,LOC107755152 other upstream 122252 13305669 ~ 13315684 (+)
kin kin,LOC102791470 other upstream 283578 13150736 ~ 13154358 (+)
gnai1 gnai1,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other upstream 1622631 11796982 ~ 11815305 (+)
ndufb2 ndufb2,LOC107755897,LOC107578274,LOC107694192,LOC107590801,LOC107710676 other upstream 1746807 11689314 ~ 11691129 (+)
LOC122342701 im:7143923,cpne8,LOC101886030,LOC107566841,LOC108279828,LOC107689738,LOC108427072,LOC103365370,LOC107666208,LOC102193326,LOC102297242 other downstream 442872 13882894 ~ 13961098 (+)
trmu trmu other downstream 545495 13985517 ~ 13991772 (+)
tbc1d22a tbc1d22a,LOC107689730,LOC107710738 other downstream 737408 14177430 ~ 14294618 (+)
tafa5a fam19a5a,fam19a5,LOC107552289,LOC107689731,LOC107563619,LOC107721159,LOC106609108,LOC103356475 other downstream 960007 14400029 ~ 14482821 (+)
LOC122343376 LOC107699368,LOC107601007,LOC107733210,LOC105896948,LOC104933464 other downstream 1717733 15157755 ~ 15214432 (+)

Expression


Co-expression Network