G28349


Basic Information

Item Value
gene id G28349
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13227700 ~ 13227947 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU42027
GACCCAGTCTGTACGTAATGCCATAACAGAACATGCCAGCTGGATTATCTTCAGTAGTTATTATGAATGAGTCCATCCCAGAAACTTTTAAGCGGTTATTCAGATGCAAAGTATCTTTTACATAACAAACCCCGCTACTCGGGTGACTAATAGAGGTGCAATCAATCCGTGACGAACAAGAACCTCCTTTGTAGGATCTGAGATGttcatgggggaaaaaaaaattaattctctAATGCTTATGTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42027 True 248 lncRNA 0.39 1 13227700 13227947

Neighbor

gene id symbol gene type direction distance location
itih2 itih2,LOC107555817,LOC107666937,LOC107748478 coding downstream 63577 13152421 ~ 13164123 (-)
atp5f1c atp5c1,LOC107728502,LOC107748457,LOC107555824 coding downstream 76994 13146654 ~ 13150706 (-)
taf3 taf3,LOC107555823,LOC107675973,LOC107578374 coding downstream 82792 13102315 ~ 13144908 (-)
gata3 gata3,LOC107555822,LOC107748455,LOC107675980 coding downstream 136865 13075216 ~ 13090835 (-)
celf2 celf2,LOC106927059,LOC108233267,LOC101484207,LOC107092344 coding downstream 556229 12539057 ~ 12671471 (-)
pfkfb3 pfkfb3,LOC107555830,LOC107748462,LOC107663448 coding upstream 40128 13268075 ~ 13275474 (-)
rbm17 rbm17,LOC107755150,LOC107748463,LOC107663450 coding upstream 53236 13281183 ~ 13301329 (-)
ndufa12 ndufa12,LOC107667714,LOC107755161 coding upstream 145684 13373631 ~ 13375343 (-)
nr2c1 nr2c1,LOC107689225,LOC107755159 coding upstream 148227 13376174 ~ 13384446 (-)
fgd6 fgd6,LOC107755156,LOC107689226,LOC107667720,LOC107748482,LOC107567667,LOC107597032 coding upstream 156641 13384588 ~ 13403216 (-)
LOC122342546 NA non-coding downstream 156180 12988707 ~ 13071520 (-)
G28130 NA non-coding downstream 958960 12265665 ~ 12268740 (-)
LOC122342788 NA non-coding downstream 989563 12236645 ~ 12238137 (-)
G28117 NA non-coding downstream 1072449 12148132 ~ 12155251 (-)
G28086 NA non-coding downstream 1208699 12018609 ~ 12019001 (-)
G28350 NA non-coding upstream 1147 13229094 ~ 13229319 (-)
G28353 NA non-coding upstream 14559 13242506 ~ 13245388 (-)
G28359 NA non-coding upstream 22704 13250651 ~ 13252034 (-)
G28377 NA non-coding upstream 83926 13311873 ~ 13319748 (-)
LOC122342564 NA non-coding upstream 115779 13343726 ~ 13344257 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other downstream 40810 13176961 ~ 13186890 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other downstream 738519 12465612 ~ 12489181 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other downstream 1211933 12014631 ~ 12015767 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other downstream 1231061 11841965 ~ 11996639 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other downstream 1543838 11653470 ~ 11683862 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other upstream 88985 13316932 ~ 13361938 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other upstream 183677 13411624 ~ 13432703 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other upstream 464524 13692471 ~ 13698715 (-)
LOC122343280 NA other upstream 587627 13815574 ~ 13831851 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other upstream 747410 13975357 ~ 13980559 (-)

Expression


Co-expression Network