G28544


Basic Information

Item Value
gene id G28544
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13869422 ~ 13870614 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU42309
GAAGTCGATACGGATTTGCTATTGAGTTTAAAGAGTTTTATTGGCTTGACTCTAGTGCTTTACCTCTTCTCTGTGGCTGGACTCTGTGCCGATTCATCACTGCTGCTTTCATCGCCAGACCTTGGAGAGCATTCCCGAGCAGAGCATCCAGTTCAGGATTGAGTTCTGCTTTCTCCTTCAGCATGTGGAAGAGCAGCTGGTTCTGTGTGGCGCTGTTGATCTCCGTCTGTTTCAAACGGCCCTCCATCACTTTGATCTGAGACTCCTTCTGTGCAGCTTGTAACCCCTGA

Function

GO: NA

KEGG:

id description
ko00564 Glycerophospholipid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU42309 True 290 lncRNA 0.49 2 13869422 13870614

Neighbor

gene id symbol gene type direction distance location
LOC122343235 LOC107689737,LOC107716193,LOC107689255,LOC107584741,LOC107716201 coding downstream 84714 13763390 ~ 13784708 (-)
LOC122342931 LOC107689242,LOC107689241,LOC107584712,LOC107689720,LOC107597003 coding downstream 108566 13750834 ~ 13760856 (-)
LOC122342857 LOC107689242,LOC107584712 coding downstream 120434 13736605 ~ 13748988 (-)
slco1d1 LOC107689241,LOC107597003,LOC107584712,LOC107689720,LOC107689242,LOC107726840 coding downstream 139988 13718604 ~ 13729434 (-)
slco1e1 slco1e1,LOC107584713,LOC107716166,LOC107689719,LOC107597035 coding downstream 152199 13708792 ~ 13717223 (-)
LOC122342633 NA coding upstream 99650 13970264 ~ 13975630 (-)
alg10 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 coding upstream 105191 13975805 ~ 13980615 (-)
srr si:ch73-263o4.4,LOC107569226,LOC108427077,LOC107666211 coding upstream 111742 13982356 ~ 13985446 (-)
LOC122342640 cerk,LOC107689729,LOC107552286,LOC107710741,LOC107600034 coding upstream 834179 14704793 ~ 14725207 (-)
LOC122342645 abcd1,LOC107743108,LOC107701814,LOC107552221,LOC107727428,LOC107674359,LOC108265308 coding upstream 940394 14811008 ~ 14822661 (-)
G28564 NA non-coding downstream 2124 13866777 ~ 13867298 (-)
G28545 LOC107689243,LOC107689721,LOC107726844,LOC107569223,LOC107566846 non-coding downstream 42370 13820696 ~ 13827052 (-)
G28434 iqsec3,LOC107689235,LOC106609634,LOC107689713 non-coding downstream 256651 13610216 ~ 13612771 (-)
LOC122342564 NA non-coding downstream 525165 13343726 ~ 13344257 (-)
G28377 NA non-coding downstream 549674 13311873 ~ 13319748 (-)
G28568 NA non-coding upstream 9417 13880031 ~ 13880847 (-)
G28569 NA non-coding upstream 10691 13881305 ~ 13882012 (-)
G28570 NA non-coding upstream 11577 13882191 ~ 13882407 (-)
G28577 NA non-coding upstream 110176 13980790 ~ 13981164 (-)
G28594 NA non-coding upstream 121437 13992051 ~ 13992802 (-)
LOC122343280 NA other downstream 37571 13815574 ~ 13831851 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other downstream 170707 13692471 ~ 13698715 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other downstream 436719 13411624 ~ 13432703 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other downstream 507484 13316932 ~ 13361938 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other downstream 682532 13176961 ~ 13186890 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other upstream 104743 13975357 ~ 13980559 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other upstream 284878 14155492 ~ 14176742 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other upstream 817259 14687873 ~ 14704622 (-)
LOC122342642 pfkfb3 other upstream 937929 14808543 ~ 14810711 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other upstream 1153973 15024587 ~ 15027663 (-)

Expression


Co-expression Network