G28545 (LOC107689243,LOC107689721,LOC107726844,LOC107569223,LOC107566846)


Basic Information

Item Value
gene id G28545
gene name LOC107689243,LOC107689721,LOC107726844,LOC107569223,LOC107566846
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13820696 ~ 13827052 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU42310
ctttattattatctCCAAGTACATATTCAAGTTTTCGTAGAATATAAATCTAgcaaaacatttacagcaaCGGTAGTCAAATACTGTACAACACAACATTTGTCCTCACTAGTGTCCATCTACGGTATAAACGCCGCTTTTTGTttcacatacaaaaacaaacaaacaaaataaatacacccatacatttaaaaacggATGTGTTCGTTGGTAATAACACAAATGGCCGTCCGCGTTGGAGCACGTCCCAAGTACAATCTAAAAGTCAAACACATCTGATACACATGAAACTGCTCAATAAAACTTCGAAATTATATCATACATGTCGACCGAAGCTCGTTTTCTTGAGTAATGCCTTTATTCGGACTCTAGCTGAAGCAATGTGTTTTACGTTATAGATTCAATTGGTggcttaaaggaatggttcatcAACTATCTCTTTTTTTGGAGATCGTCTTTCCCCTGGTTACCGCACgcttttattacatataaaaggGCAGCTTGAGCATTCTTCACAACCTCTCcttttacgttttaaaaataCGTTTTGGAACCAACTGATCGTGGGTAAACGAGGACCAAGGTCCGTTTCCGTCTGTGGGTGAACCATTCCTATTAAAGTCTAAACTGATATATTGCCGAACACCACGCCAATTTAATTTGTGCTTCTCTCAACCAAATTAAATTTTATCCGATGGAATATCAAATTACGCGTAATCATGTATCTAAACGAAACGCACAATACACGAGACATGATGTGCACGATTATCACTGGACAGAGTGAAACCCTTTAAACGGGAACTTGAGTCAACGTTATTGGTTGTTTTCACAAGAGCCATCATGGTTTCGATAAAGCTACAACCACAACATAGAGACTTTCAAGGCTTGGCGCACCTTGACGTGTATTTCTCTATTCGTATACTTACAAAGCAGCACAACAGAATATCGGATAATACAATGTACTTGTCAAAACGGTTATCCCACACTGTTTCATGGACAAGACCAATGCGGTGACGTTTGTACACTAGGCTATAAGGAAGACAAATCAAAATGACGATGAAAAAAAAcgtgtaaacatttaaattacgtttaaaaagcaaatattaaagaTTTTGGTAACAGTTTAGTAAAGGAACGGTTCTCACTGTCAACTAgtcgcttattagcatgcctattattaacatatcgtctgtttatttagtacttataaagcacatattataCATGACCATATTGTGCATATAATACCTAAtgactaccttactattaaaaagcagcaaattaggagtatTCGACAAAAGCTGCAGATAATCGTTGGTTCGTAGCGAAAATCGgaccttgaaataaagtgtgaccaaaactttaaaatgaattagtcttaaaaacaacaataatgatGTAAACCgtcaaaagtaaaaattgtgaagtatttttaaGGCCACACTACACTATCACAGGGAAACGCAGAAAGCTACATATGACGTTTCGTGTCGATAATCTTTAATCCTACAAACATGAAGGgtcaaattacaaaataaactacTGTACTTCAAAAACTAGACAGTGATTGTACATTACAAACAAGCAATGGGATTTGCTACACGTTTTCAAAGCCTTGGAGATTTTACCGAGCAGGCGAGAGGGACgtgaaaatgctatttattcgCTTGTGTTTGATTATTGTTCATATTTCAGGAGTTACTACACTTCAATCACTTGGTGGGGATTATTTGTAGACAAAAATTAGACACATGGCAAAAGCGTGCAAAACTAATATTGGCAATGGGTTGCaatttgaaatataaagaaaaattgaTTCGTTGGATATTTTTGATCTGCATAATTCCATTAATGATTCTGTGAAAAATACTACTAAACGATGAGTAGGCGCGTCCAAACTTTTGACCGATAGTGTagcttgtatatatatttctttgtaagtgtcaaatataaaatttgCATTGAGTTCGCACTTAGACATTACATTAAGAAACCAAAAATATCcttctgcatatatatattattgaactTACAGCTAACATctcattttacataaataagCAGAGGATATTCATCTGACAGTGGAGAAACGAGCCAGTAGATCTGCATGTACTGTGACGCAAAAACATACTGACGATATATTATAAAAGCTGACTTGGCActgcgtgtttgtttgtgtgtgctctACAACCCTGTTCTTTCCGTCGCGATGAAGAGAGGCTCAACCTGTCCGATACGGTGGGCGGATCTGACGTCAGGGTTGAACGCCGCTCAATCGATACATTTTCATCCACGTTTAACCAACCCAGAGGTTTCGCACGAGTTATTCGACATCCGACGCGTCGTTGTCTGATAGGTGGTAGTTTGACCCTTTAACCCGGATGTATTCCACTTGCCGATCCTCATCAGAATCCGAGATCCCGCATGAGCAGAGCCGGTTTTCAAACAAGGACTCGATTTCTTCCAGCCGCCTTCCTTTAGTCTCGGGCAGGCAGCCATAAATGCAGAAGAAACCAGTTAGGGCTAAACTGGAATACAGGAAAAACAACCGTAGTAAGTCAGGTACTGGGCCATATGGAGGAACGTTAGAGACACCAGCACATTAAAGGTCCAGTTTACTCCAGCCGAACAAGCATTGCCTGTGCTTCTGGCCCAAAGAGGGTAGATTTCAGAATTAACTGTCCATGGCATTGGTCCCATTCCTGTCAAGAGGCGAAAGCGTTTTAAATTACCGCAATGCAATGTCACAATGAATACATGGCTGATATAATTCACTCAGGGCAACCTCTGGTTGTGTCTTGCTGAATGGCACAGTGGTGATGGATTGTATGGATAATCACAAACAGATATCATCTTACCCGGGGCAAAAAATGCGAGATAGAACACCAGTCCCAGGAGCACAACCCATGAATAAGATGTTGGGCAAAAATTATAAGCCCATATACCACTATCTGGCACACGTGTGGAGTTGGAACACCTGTTAGAGTCGAAACAAACACAATGAATTTTACAAGGtaattgaataaatacagtatttaagcgtcactattaacaaactaaaatgtgttcgaaaatataaaatacaagtaTTGAAACACCACGTTTTGAAGGACATGACAATACATTTGAGATTTTACGTATCGGATAACTTATATGGTTTAAcgtagaataaataaaaacatattatgcCCAAATTTACACAGAACAAATCAAGTGCTTGCGCATACAGAGACTCTGTTTCAGTGGTGACTCACTTGCCCCACGCTGCTCTCTCAGTGGAGGCCGGATTGACGGGCACACAGGAGGAGGCAAACACAGCAGTGCTGTTTTCCTGATAACAGTAACCACAgctagggtctaacatacaggGCTCGCATGACCTGAAACACAAAGTAATGTAAGAGCAAAACAAAcgactcaaaaaataaaactcaaccAACAGACACTGAATTCTTATCTGAATTCAACACAAATCAAAATACACACTTCTAGAGCTCCTTTTAGGCATGACTCATCAGTGAGCATTGTTCTAAACAAACAAGCCAAAAAAGTTAATTGCATTCGTAATCTTCCATCAAAACATAAGAATTTCCTCCACAATCTGGAACAACTTACATGTGCCTCATGGTGTCATGCACAGCATGTACAGCCAACTGGAAGCCATTTCGGAGGGTTCTGGGAGTGTCCCTCCAGTTCCTCCTTGCGCAAAGTAGCAGATACTCATCGTACTACTTGGCCGTTTCCCTATTATATGGCCCTGTCCAGCTCTCCTCGTGCTCTCCTCAGATTTATCTCCTTCAGTATGCAGGGAGTCTCACTGAACTTCCTCACGATGGCATGTATGGACGTGCCATCTCGGGAGGACCTGGACTCCGCAACCTGATTGGGTTGCAGGCAGCGGCTCATGGCGCAAGTAACActcaggaaagaaaagaagagagcgCTGTCTGTGGCCACCACCTGCAAGCCGTTACCTTTTTGAGGGTCGTCTTCAGGTGTTGCCAACTGCTTTCGGTTGAAAGTAGCTAAAAACCAGCTTGTTAGGAGTGAGCAACGTGCATTAACTTGACATGCTCTCTACACAGTCCCCCCTAGTAAGGGGAATCCGTCTTTCGCACATACAGACCAAACTTACTAGAGAAGTGTGAAGTGCGACATGATAATTTCTCTACATCTCACACACTTTAATGCACTTTGTACGGAACACATACACTCGTTTCGAACTAGAATCATGGAATATCCGGTGACGTCCACTTTGCAGGTCACTTGCAGTCAAATAAAACATACGAAATATGCAGAGCAGGGAGGAACGCTGCCCTATTCCCTTCAAAACGTTTACCCTTCCGTATTGAGAGCATGAATGACTATGCATGTTTATGAAGGATCCCATTAACATGCACGTCAACATGTATTTCTTATTCATCTTTAGAAGTCTCGGTCAATGGGTGTTGCACAGCGGTTACAGTGAGTCCATTAAACACTGTATTCCGTTATGTAAGAATGTTGAAAGGGCTTTCGAGACAGTCTATGCACAAATTGGTTTGCTGCTGTGACGACAGCGCAGTCATTACGCATCCATTAGCAGGAAAGTAAACATGCTTTGTTTCGGCGATCTGTGTACGGTGAATTGGATGACAGCGTAAGAGTAAATTAGGACGGAGAGAGAGGCCGCGCTCTTTCTGACTGGGAGGAGGGCGTCATTGTTATGAGGTTACACACTTCAGACTCTCTATTAGTGTGACATTAAGGAACAGCGAGCAGCTTGGACCCGCTAACACAAGCAGTTATTGCTGCAACGTACACACCAACCGAACCAaacattaaaattgattttcaCTCAGGTTGGAGACCAATAAGCTGTCTGTTGACTAAAGCAAGAAGAATTAGAAAGGGTCTGATTTCACAATTAGAGTGCTGGCAATGACACTTCACTGGAATCAACGGCTAGCCTTTTTACTTCCCTGGTATTCATATAGTGCATACGTACAAATTGAATTCAACAGTGTCTCTATAACCTCTGAGTGTCCATGTGCATCTCCCAGCCTTGATATTTAGTTTATTCCAGTATGAATCCCCCAGATCTCTACAGCAGAGGTCGTGAAACTTTTTCACGTTAAAGGCttgttcacaccaagcacgataacTTAAGATAATGATAAAAACTATATTTGCGTCCGCACCAGTGAGCAATATCGTCCGTTTAATCTCAGCTCGTGCATGTCTGCCGCTTTGAATTCTCGAGCTCCTGAGAactgtgattggctgtcagCGTTTGTATCATTCATCCGCTGGAAAGAATCGTTCTGAAAACGATCCCTTGTTCTTTTGGTCAACCAACCTCCGCAGAAAAGCAATGCTGGCAATCAGCTGGCTGACAGAGGAAGTCTTGTATATTTAGGAACTCTTAGGTGCTCTGGGGGACTGTCTGTTCAGTCACTTTTGATACGTGTTAAATTACAATACACCAGATAACAAGACAGCTGTCACTATATGGTGACCGAGTGTACTATATCTTATGTAGTGTActcatgaattatttatattgcCATTGGCGAGAAGCTGCCCATTAAATCACACTCACAGATGTGTTGTGCAGCTGGAGTTGGGTGTCGCGGGGTCCGTCAGATGTAGCGTAACAGGGGGAGAATGCTGGGCTGACAGGAGGAAGCCAACAGATAGGATGCACAGACTCAAAAC

Function

NR:

description
PREDICTED: proton myo-inositol cotransporter-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42310 True 5697 lncRNA 0.41 3 13820696 13827052

Neighbor

gene id symbol gene type direction distance location
LOC122343235 LOC107689737,LOC107716193,LOC107689255,LOC107584741,LOC107716201 coding downstream 35988 13763390 ~ 13784708 (-)
LOC122342931 LOC107689242,LOC107689241,LOC107584712,LOC107689720,LOC107597003 coding downstream 59840 13750834 ~ 13760856 (-)
LOC122342857 LOC107689242,LOC107584712 coding downstream 71708 13736605 ~ 13748988 (-)
slco1d1 LOC107689241,LOC107597003,LOC107584712,LOC107689720,LOC107689242,LOC107726840 coding downstream 91262 13718604 ~ 13729434 (-)
slco1e1 slco1e1,LOC107584713,LOC107716166,LOC107689719,LOC107597035 coding downstream 103473 13708792 ~ 13717223 (-)
LOC122342633 NA coding upstream 143212 13970264 ~ 13975630 (-)
alg10 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 coding upstream 148753 13975805 ~ 13980615 (-)
srr si:ch73-263o4.4,LOC107569226,LOC108427077,LOC107666211 coding upstream 155304 13982356 ~ 13985446 (-)
LOC122342640 cerk,LOC107689729,LOC107552286,LOC107710741,LOC107600034 coding upstream 877741 14704793 ~ 14725207 (-)
LOC122342645 abcd1,LOC107743108,LOC107701814,LOC107552221,LOC107727428,LOC107674359,LOC108265308 coding upstream 983956 14811008 ~ 14822661 (-)
G28434 iqsec3,LOC107689235,LOC106609634,LOC107689713 non-coding downstream 207925 13610216 ~ 13612771 (-)
LOC122342564 NA non-coding downstream 476439 13343726 ~ 13344257 (-)
G28377 NA non-coding downstream 500948 13311873 ~ 13319748 (-)
G28359 NA non-coding downstream 568662 13250651 ~ 13252034 (-)
G28353 NA non-coding downstream 575308 13242506 ~ 13245388 (-)
G28564 NA non-coding upstream 39725 13866777 ~ 13867298 (-)
G28544 NA non-coding upstream 42370 13869422 ~ 13870614 (-)
G28568 NA non-coding upstream 52979 13880031 ~ 13880847 (-)
G28569 NA non-coding upstream 54253 13881305 ~ 13882012 (-)
G28570 NA non-coding upstream 55139 13882191 ~ 13882407 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other downstream 121981 13692471 ~ 13698715 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other downstream 387993 13411624 ~ 13432703 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other downstream 458758 13316932 ~ 13361938 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other downstream 633806 13176961 ~ 13186890 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other downstream 1331515 12465612 ~ 12489181 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other upstream 148305 13975357 ~ 13980559 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other upstream 328440 14155492 ~ 14176742 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other upstream 860821 14687873 ~ 14704622 (-)
LOC122342642 pfkfb3 other upstream 981491 14808543 ~ 14810711 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other upstream 1197535 15024587 ~ 15027663 (-)

Expression


Co-expression Network