LOC122342642 (pfkfb3)


Basic Information

Item Value
gene id LOC122342642
gene name pfkfb3
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 14808543 ~ 14810711 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU42549
GGGACGTGCCGTTAGAGATTACCGGGAAGCAAAAGAGAGGAGGTCTTCGAAATTTTTAACTGATACAAGTCGGCGCTAGTCGTTCGAAGAAGAAGGTTTGCAAAGAAGGGCGTCTTTAATTCTAGACGTTTTGGAGTTTCCGAAGCCGGTGTGTAacgtgctgctgctgctgctgtgttcCTGCTGATTTTTCCCAATCCTAAAGGAATGCCAAGGGAACTAACACAGAACAGGATCCAAAAAATCTGGATTCCCTCTAAGGATGACAAACCTTCAATGCCCCGCACATcacGCGGAGGCCCCCACCTGGCGAACCCCCCGACAGTGATAGTGATGGTAGGGCTCCCCGCTCGGGGCAAAACCTACATTTCAAGAAAACTCACACGCTACCTCAACTGGATTGGGATTCCcacaaaagtttttaacgtCGGAGAGTATCGACGAGAGGCTGTGAAACACTACAGCTCTTATGATTTCTTCAAATCGGACAATGAGGATGCTGTAAAAATCCGAC
>XM_043236612.1
CATCTAATTACCCATTCGCCGGTTTGCAAAAATAACTCGATACGGAAATAAAACGCGCTTATTATTTTACGCTTAGCCTATGAGTTCGCCCTTGCAtccattattaatttattgctttttattgccGGAAATAATCGTTTAAAAATCAACAAGCTTGGGAATTTACAGCCCGAAGACGCTTGCTATTATTTCACGGGTTTATGGAGATTGATGGATTGATGTAGTGACTCCCCGCACGTAGGCAAGCGGGGATGCCCACTCGACGCGTGACCTGCATCTTTAATGCTCTCGAGCGCGCAGCGCCTTACAAGCCCTTTTTAATCATTTGCGCGTATCACGCGCGTCTAGAAatgtgacaataataataaacaataataataaatggcatGTTATTGAAACGCGTGGATGTAAATTGTGAACACCGTAgccttatatttatttttttcgtaACGACCAACATCCACCATTCGGCCGCAAAGCGGCGCACGTGGACGCCGTGACCGGCAGGCCCCGCCCTCCGCCAGCGCGTCACGGCATCGTGTCGCCGGTTCCGTATTTAAAGCGCGGACGGCGAGGGACGTGCCGTTAGAGATTACCGGGAAGCAAAAGAGAGGAGGTCTTCGAAATTTTTAACTGATACAAGTCGGCGCTAGTCGTTCGAAGAAGAAGGTTTGCAAAGAAGGGCGTCTTTAATTCTAGACGTTTTGGAGTTTCCGAAGCCGGTGTGTAacgtgctgctgctgctgctgtgttcCTGCTGATTTTTCCCAATCCTAAAGGAATGCCAAGGGAACTAACACAGAACAGGATCCAAAAAATCTGGATTCCCTCTAAGGATGACAAACCTTCAATGCCCCGCACATcacGCGGAGGCCCCCACCTGGCGAACCCCCCGACAGTGATAGTGATGGTAGGGCTCCCCGCTCGGGGCAAAACCTACATTTCAAGAAAACTCACACGCTACCTCAACTGGATTGGGATTCCcacaaaagtttttaacgtCGGAGAGTATCGACGAGAGGCTGTGAAACACTACAGCTCTTATGATTTCTTCAAATCGGACAATGAGGATGCTGTAAAAATCCGACAGTAAGTTGTGTGCCTGAACTACACAATGCGTcatatgaaaataatgtatgaaa

Function

symbol description
pfkfb3 Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to act upstream of or within fructose metabolic process and phosphorylation. Predicted to be active in cytosol. Is expressed in Purkinje cell. Orthologous to human PFKFB3 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3).

NR:

description
PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 isoform X4

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0006000 fructose metabolic process biological_process
GO:0006003 fructose 2,6-bisphosphate metabolic process biological_process
GO:0003873 6-phosphofructo-2-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42549 False 514 TUCP 0.48 3 14808597 14810137
XM_043236612.1 True 1142 mRNA 0.47 3 14808543 14810711

Neighbor

gene id symbol gene type direction distance location
LOC122342640 cerk,LOC107689729,LOC107552286,LOC107710741,LOC107600034 coding downstream 83336 14704793 ~ 14725207 (-)
srr si:ch73-263o4.4,LOC107569226,LOC108427077,LOC107666211 coding downstream 823097 13982356 ~ 13985446 (-)
alg10 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 coding downstream 827928 13975805 ~ 13980615 (-)
LOC122342633 NA coding downstream 832913 13970264 ~ 13975630 (-)
LOC122343235 LOC107689737,LOC107716193,LOC107689255,LOC107584741,LOC107716201 coding downstream 1023835 13763390 ~ 13784708 (-)
LOC122342645 abcd1,LOC107743108,LOC107701814,LOC107552221,LOC107727428,LOC107674359,LOC108265308 coding upstream 297 14811008 ~ 14822661 (-)
LOC122342646 prkcq,LOC107748461,LOC107555829,LOC107675981 coding upstream 15556 14826267 ~ 14847177 (-)
brd1a brd1,LOC107744592,LOC107563621 coding upstream 313334 15124045 ~ 15136539 (-)
alg12 alg12 coding upstream 333077 15143788 ~ 15148210 (-)
LOC122342488 LOC107744205,LOC107601002,LOC107699198,LOC107687568,LOC107562147,LOC107741716 coding upstream 744540 15555251 ~ 15588908 (-)
G28597 NA non-coding downstream 734017 13994018 ~ 14074526 (-)
LOC122342415 NA non-coding downstream 738138 14068087 ~ 14070405 (-)
G28594 NA non-coding downstream 815741 13992051 ~ 13992802 (-)
G28577 NA non-coding downstream 827379 13980790 ~ 13981164 (-)
G28570 NA non-coding downstream 926136 13882191 ~ 13882407 (-)
LOC122342647 NA non-coding upstream 729 14811440 ~ 14825838 (-)
G28738 NA non-coding upstream 192438 15003149 ~ 15003429 (-)
LOC122342397 NA non-coding upstream 207074 15017785 ~ 15023863 (-)
G28789 NA non-coding upstream 398973 15209684 ~ 15213451 (-)
G28850 NA non-coding upstream 606145 15416856 ~ 15418238 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other downstream 103921 14687873 ~ 14704622 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other downstream 631801 14155492 ~ 14176742 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other downstream 827984 13975357 ~ 13980559 (-)
LOC122343280 NA other downstream 976692 13815574 ~ 13831851 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other downstream 1109828 13692471 ~ 13698715 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other upstream 213876 15024587 ~ 15027663 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other upstream 790729 15601440 ~ 15611575 (-)
G28898 NA other upstream 1121783 15932494 ~ 15932864 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other upstream 1897063 16707774 ~ 16708960 (-)
prkchb prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690 other upstream 2075442 16886153 ~ 16900295 (-)

Expression


Co-expression Network