G28891


Basic Information

Item Value
gene id G28891
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15841372 ~ 15841855 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU42853
gtctgtagaagcttggtgcagtggacgatctgatcagacgtgtgactaatcgttgactcttaccaaaaagcaaatatgggcgcaggaaaaagtaaattgacgggagatccaaagtttatgcatacatattcggcagacagtgtgcgatatctcaatgagtggaataaaaaatatgatttcagtggtaaattagtcaaaagggactgcgctctcttaataaacaaaataaaggttgatttatccttacccaagggaaaaaaggttgatttgttgaaacttcaattgattgaagcgacgaagtggcaagagcaggctgataaaagacaggtggaagtcgaagagaaaaaaagacagaaactagAAAGATTGGTTGCAGTGCAAAAAGAAGAGGATCCAGCAGATTATGTTGGGAGACCAGAGGCATTGTATAGGCAAGAAAAGTTAAGAGTAGAGAGAGCAGCTAGAGGCCAGAAGACGGCTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42853 True 484 TUCP 0.41 1 15841372 15841855

Neighbor

gene id symbol gene type direction distance location
LOC122342219 LOC107554691,LOC107656224 coding upstream 196498 15638512 ~ 15644874 (+)
nup50 nup50,LOC107699201,LOC107562145,LOC107687567,LOC107601009,LOC107719874 coding upstream 239366 15595661 ~ 15602006 (+)
LOC122343379 ppm1j,LOC107668166,LOC107708158 coding upstream 485817 15342262 ~ 15355555 (+)
creld2 LOC107730684,LOC107699369,LOC107601011 coding upstream 683738 15149133 ~ 15157634 (+)
LOC122342621 zbed4,LOC107744591,LOC107663563,LOC107563622 coding upstream 697961 15136921 ~ 15143411 (+)
LOC122342595 NA coding downstream 532721 16374576 ~ 16377941 (+)
LOC122342597 rab3ip,LOC107709967,LOC107689177,LOC107757202,LOC107675141,LOC107554773 coding downstream 536778 16378633 ~ 16398499 (+)
LOC122342594 LOC107709965,LOC107554744,LOC107700908,LOC107675140,LOC107569318,LOC107757199 coding downstream 556777 16398632 ~ 16427186 (+)
ptprb LOC107709971,LOC107685369,LOC107738449,LOC107575178,LOC107562139 coding downstream 594536 16436391 ~ 16457297 (+)
LOC122342226 NA coding downstream 773490 16615345 ~ 16617218 (+)
G28890 NA non-coding upstream 706 15840202 ~ 15840666 (+)
G28889 NA non-coding upstream 86244 15754813 ~ 15755128 (+)
G28888 NA non-coding upstream 103610 15737468 ~ 15737762 (+)
G28882 NA non-coding upstream 115818 15725192 ~ 15725554 (+)
G28813 NA non-coding upstream 349190 15488076 ~ 15492182 (+)
G28896 NA non-coding downstream 86276 15928131 ~ 15928838 (+)
G28901 NA non-coding downstream 215620 16057475 ~ 16057700 (+)
G28911 NA non-coding downstream 570162 16412017 ~ 16419965 (+)
G28912 NA non-coding downstream 570671 16412526 ~ 16420148 (+)
LOC122342600 NA non-coding downstream 615622 16457477 ~ 16461526 (+)
cdkn1d LOC107699204,LOC107719868,LOC107562144,LOC107601015,LOC107758204,LOC107687563 other upstream 186094 15565499 ~ 15655278 (+)
G28806 LOC107744205,LOC107601002,LOC107687568,LOC107699198 other upstream 285690 15439334 ~ 15555682 (+)
LOC122342869 NA other upstream 421069 15413147 ~ 15420303 (+)
LOC122343376 LOC107699368,LOC107601007,LOC107733210,LOC105896948,LOC104933464 other upstream 626940 15157755 ~ 15214432 (+)
tafa5a fam19a5a,fam19a5,LOC107552289,LOC107689731,LOC107563619,LOC107721159,LOC106609108,LOC103356475 other upstream 1358551 14400029 ~ 14482821 (+)
G28899 NA other downstream 143364 15985219 ~ 15985726 (+)
G28982 NA other downstream 632043 16473898 ~ 16474381 (+)
atp5mj NA other downstream 1196564 17038419 ~ 17040830 (+)
G29526 NA other downstream 2458560 18300415 ~ 18301189 (+)
G29545 NA other downstream 2594605 18436460 ~ 18461317 (+)

Expression


Co-expression Network