G28912


Basic Information

Item Value
gene id G28912
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16412526 ~ 16420148 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU42887
CGTTCTTGAGAAAACGCTGATAAACTCGACGTTAATATTAACTGTATGTTAATAATcaatacaaaaggaaaaaaaacacacgggtAACGACAATTGAACGAAAAGCCCAATTTTTCCCCTAATCTCTCGCAAGTTCGTTCGACTCACGACTCtccttttttccttctctTTCTCTATTAACCAATCGGATTCCTCTCACCTACTTTGGGGCGGGTTTAAATTACAGGACATCCAATCAATGAAAACCAAACAAGTTAGATTGTATGCAC

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU42887 True 269 lncRNA 0.38 2 16412526 16420148

Neighbor

gene id symbol gene type direction distance location
LOC122342597 rab3ip,LOC107709967,LOC107689177,LOC107757202,LOC107675141,LOC107554773 coding upstream 14027 16378633 ~ 16398499 (+)
LOC122342595 NA coding upstream 34585 16374576 ~ 16377941 (+)
LOC122342219 LOC107554691,LOC107656224 coding upstream 767652 15638512 ~ 15644874 (+)
nup50 nup50,LOC107699201,LOC107562145,LOC107687567,LOC107601009,LOC107719874 coding upstream 810520 15595661 ~ 15602006 (+)
LOC122343379 ppm1j,LOC107668166,LOC107708158 coding upstream 1056971 15342262 ~ 15355555 (+)
ptprb LOC107709971,LOC107685369,LOC107738449,LOC107575178,LOC107562139 coding downstream 16243 16436391 ~ 16457297 (+)
LOC122342226 NA coding downstream 195197 16615345 ~ 16617218 (+)
chrna2b chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496,LOC108434998 coding downstream 280895 16701043 ~ 16710156 (+)
rhoj rhoj,LOC107697308,LOC107743974,LOC107701469,LOC107707080,LOC108257930 coding downstream 401965 16822113 ~ 16838424 (+)
six4b six4b,LOC107743978,LOC107589068,LOC107563693,LOC107697301,LOC107701468,LOC107718441 coding downstream 504869 16925017 ~ 16932206 (+)
G28901 NA non-coding upstream 354826 16057475 ~ 16057700 (+)
G28896 NA non-coding upstream 483688 15928131 ~ 15928838 (+)
G28890 NA non-coding upstream 571860 15840202 ~ 15840666 (+)
G28889 NA non-coding upstream 657398 15754813 ~ 15755128 (+)
G28888 NA non-coding upstream 674764 15737468 ~ 15737762 (+)
LOC122342600 NA non-coding downstream 37329 16457477 ~ 16461526 (+)
G28969 NA non-coding downstream 44297 16464445 ~ 16464690 (+)
G28985 NA non-coding downstream 54595 16474743 ~ 16475333 (+)
G28991 NA non-coding downstream 99263 16519411 ~ 16540160 (+)
G29011 NA non-coding downstream 189576 16609724 ~ 16610004 (+)
G28899 NA other upstream 426800 15985219 ~ 15985726 (+)
G28891 NA other upstream 570671 15841372 ~ 15841855 (+)
cdkn1d LOC107699204,LOC107719868,LOC107562144,LOC107601015,LOC107758204,LOC107687563 other upstream 757248 15565499 ~ 15655278 (+)
G28806 LOC107744205,LOC107601002,LOC107687568,LOC107699198 other upstream 856844 15439334 ~ 15555682 (+)
LOC122342869 NA other upstream 992223 15413147 ~ 15420303 (+)
G28982 NA other downstream 53750 16473898 ~ 16474381 (+)
atp5mj NA other downstream 618271 17038419 ~ 17040830 (+)
G29526 NA other downstream 1880267 18300415 ~ 18301189 (+)
G29545 NA other downstream 2016312 18436460 ~ 18461317 (+)
G29642 NA other downstream 2463031 18883179 ~ 18886402 (+)

Expression


Co-expression Network