G29127


Basic Information

Item Value
gene id G29127
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16955455 ~ 17026339 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU43160
GTACatttaagaacatttattttcgCATTCAGTATTGAGTACATCTTAAGTGCAAATAGTTAAGAGTCAATGGCTAAAAGAATGAACAACACTTAACATAGTACAAATATTGACAGATTCTAGCTGGCAATCACTCACTGAAGCTtccttctcctccctctcttttgttttgtatcattttaaaaaagatcaaTGACAGCACCTAAAAACATGAATCTCTGTAGCGGAGTCCTACGGAAAAGAAACATACCGTGATGCTACGAGTGAGCCGACCATATCTAATCAGAACATTGCTAAATAGTTGCGTTTGTGCCCAGATATCATGAACCTCAGCAGATCCATGCGTCTAGCTGACAATGATGTTTATGTTCATTATGTTCACAGATATAGTGATGGAAGAGGAAAAGCCCCACCCAACGCCCAAGacacaaaaaagcttttttttttccaagaagaGAGTGTCACTGGAGAGCAATAAAGCTGGAGAGATCTTTCACATACTACAGAGATTTTCAGCACAGCTGAGAAAGCACACAAACTTAAAAGATCAAAAGAGAATTCATCAGCACTTAAGACTCTTGACTTCATGCACTTTATGAgcaacacatacaaaaaaaaaaaatcacatctagTCTTTTTGCCAGATTTGAATTATACGTATCAAGGTTACTTCTACAATTCGTTGAGTAGTTGTACTTCTGACTAGATCCTGATTTGAGAGACAGCacgctttgctttttttttttttctttttttttttttttttttttttttttttttg
>TU43163
GTACatttaagaacatttattttcgCATTCAGTATTGAGTACATCTTAAGTGCAAATAGTTAAGAGTCAATGGCTAAAAGAATGAACAACACTTAACATAGTACAAATATTGACAGATTCTAGCTGGCAATCACTCACTGAAGCTtccttctcctccctctcttttgttttgtatcattttaaaaaagatcaaTGACAGCACCTAAAAACATGAATCTCTGTAGCGGAGTCCTACGGAAAAGAAACATACCGTGATGCTACGAGTGAGCCGACCATATCTAATCAGAACATTGCTAAATAGTTGCGTTTGTGCCCAGATATCATGAACCTCAGCAGATCCATGCGTCTAGCTGACAATGATGTTTATGTTCATTATGTTCACAGATATAGTGATGGAAGAGGAAAAGCCCCACCCAACGCCCAAGacacaaaaaagcttttttttttccaagaagaGAGTGTCACTGGAGAGCAATAAAGCTGGAGAGATCTTTCACATACTACAGAGATTTTCAGCACAGCTGAGAAAGCACACAAACTTAAAAGATCAAAAGAGAATTCATCAGCACTTAAGACTCTTGACTTCATGCACTTTATGAgcaacacatacaaaaaaaaaaaatcacatctagTCTTTTTGCCAGATTTGAATTATACGTATCAAGGTTACTTCTACAATTCGTTGAGTAGTTGTACTTCTGACTAGATCCTGATTTGAGAGACAGCacgctttgcttttttttttttttgttttttttttttttttttttttttttttttttttttttttttttttttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43160 False 781 lncRNA 0.35 2 16955455 17026339
TU43163 True 801 lncRNA 0.35 3 16955455 17026339

Neighbor

gene id symbol gene type direction distance location
hif1ab hif1a,LOC107589062,LOC107743977,LOC107563689 coding downstream 74060 16868461 ~ 16881395 (-)
snapc1a LOC107743976,LOC107697295,LOC107589064 coding downstream 87470 16864505 ~ 16867985 (-)
sgpp1a si:ch211-212g7.6,LOC107697306,LOC107589063,LOC107743975,LOC107716492,LOC107701492,LOC107563688 coding downstream 91032 16852999 ~ 16864423 (-)
ppp2r5ea ppp2r5ea,LOC107701493,LOC107707079,LOC107563687,LOC107697307,LOC107743972,LOC108434994,LOC108257929,LOC103032801 coding downstream 104299 16840705 ~ 16851156 (-)
kcnh5a kcnh5a,LOC107743971,LOC107697309,LOC107563685,LOC107701494,LOC107707078,LOC108434995 coding downstream 133985 16748716 ~ 16821470 (-)
ckbb ckb,ckbb,LOC107560383,LOC107755234,LOC101477834 coding upstream 59123 17085462 ~ 17089500 (-)
LOC122342663 NA coding upstream 97568 17123907 ~ 17130265 (-)
btbd6b btbd6b,LOC107589075,LOC107755235,LOC107718408,LOC107560384,LOC107701487,LOC107683969 coding upstream 111726 17138065 ~ 17143280 (-)
LOC122343418 LOC107683962,LOC107701452,LOC107755208,LOC107601897,LOC107568118,LOC107718425 coding upstream 384679 17411018 ~ 17482755 (-)
daam1b daam1b,LOC107701451,LOC107755211,LOC107718401,LOC108412077 coding upstream 461921 17488260 ~ 17552346 (-)
LOC122342882 NA non-coding downstream 30490 16908209 ~ 16924965 (-)
G29021 NA non-coding downstream 253784 16701068 ~ 16701671 (-)
G29012 NA non-coding downstream 345456 16609636 ~ 16609999 (-)
LOC122342602 NA non-coding downstream 404451 16550333 ~ 16551004 (-)
LOC122342601 NA non-coding downstream 409834 16544954 ~ 16545621 (-)
G29143 NA non-coding upstream 12488 17038827 ~ 17040834 (-)
G29179 NA non-coding upstream 192812 17219151 ~ 17219453 (-)
G29212 NA non-coding upstream 322950 17349289 ~ 17349506 (-)
G29273 NA non-coding upstream 527423 17553762 ~ 17553964 (-)
G29388 NA non-coding upstream 616040 17642379 ~ 17642637 (-)
prkchb prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690 other downstream 55160 16886153 ~ 16900295 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other downstream 246495 16707774 ~ 16708960 (-)
G28898 NA other downstream 1022591 15932494 ~ 15932864 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other downstream 1343880 15601440 ~ 15611575 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other downstream 1927792 15024587 ~ 15027663 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other upstream 92004 17118343 ~ 17122129 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other upstream 610684 17637023 ~ 17638742 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other upstream 708267 17734606 ~ 17744543 (-)
G29417 NA other upstream 709011 17735350 ~ 17736274 (-)
G29473 NA other upstream 944266 17970605 ~ 17979922 (-)

Expression


Co-expression Network