G29181


Basic Information

Item Value
gene id G29181
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17220257 ~ 17220616 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU43233
AGCAAATTGAGCCTGGAATTAAGATAAAACGGAAAGAAAATGGAAATGTCAGTCTGACATGttcaaaatttaattattgtagACAGGAGCCagcaaatataaatgtgcatgTTAACTAACTGTTTAAGTAAATGTAGATCTTCAGTGAAAAAGGAGCTCTTTCTGAATTAGGTGTGCTTGAATATATTTCCAAATTAATCAACATCACATTATATCAATCTCAATTGTGAGCATATCATCATTGTATTAGTGTGGGTTAAAGGAGTCAGAGCATTTTCAAACTTTTACGAGcgctgttctttaaaatacaatatcaTACCTTCAATGCCTGAAAACCTTAATTACCTTATTCAGTTGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43233 True 360 lncRNA 0.32 1 17220257 17220616

Neighbor

gene id symbol gene type direction distance location
brf1b brf1b,LOC107718407,LOC107683968,LOC107701485,LOC107755207,LOC107560373 coding upstream 43760 17122433 ~ 17176497 (+)
ppp1r13bb LOC107560381,LOC107718410,LOC107755206 coding upstream 137137 17040857 ~ 17083120 (+)
rd3l rd3l,LOC107697292,LOC107560380,LOC107743985 coding upstream 183100 17033921 ~ 17037157 (+)
rtn1b rtn1b,LOC107560379,LOC107697289,LOC107701456,LOC107718426,LOC107743986,LOC107589072,LOC108434986,LOC108257846 coding upstream 193919 16999905 ~ 17026338 (+)
six1b six1b,six1,LOC107589069,LOC107563694,LOC107697302,LOC108434988 coding upstream 280570 16937799 ~ 16939687 (+)
nudt14 nudt14,LOC107755236,LOC107718404,LOC107701483,LOC107683965 coding downstream 45841 17266457 ~ 17293636 (+)
jag2b jag2,jag2b,LOC107718403,LOC107755239,LOC107601898 coding downstream 87677 17308293 ~ 17348870 (+)
esr2a esr2,LOC107718402,LOC107701482,LOC107755240,LOC107683963 coding downstream 176519 17397135 ~ 17410852 (+)
LOC122342653 l3hypdh,LOC107684001 coding downstream 262817 17483433 ~ 17490295 (+)
nmu nmu,LOC107684000,LOC107755222,LOC107568121,LOC107701461,LOC107718432 coding downstream 344837 17565453 ~ 17578804 (+)
G29178 NA non-coding upstream 743 17219142 ~ 17219514 (+)
LOC122342667 NA non-coding upstream 101151 17090539 ~ 17119106 (+)
G29089 NA non-coding upstream 134400 17046871 ~ 17085857 (+)
G29086 NA non-coding upstream 182037 17037273 ~ 17038220 (+)
G29078 NA non-coding upstream 278947 16941016 ~ 16941310 (+)
G29192 NA non-coding downstream 73759 17294375 ~ 17294640 (+)
G29200 NA non-coding downstream 164673 17385289 ~ 17385680 (+)
G29272 NA non-coding downstream 333217 17553833 ~ 17554190 (+)
LOC122342426 NA non-coding downstream 446534 17667150 ~ 17669761 (+)
LOC122343158 NA non-coding downstream 489439 17710055 ~ 17711711 (+)
atp5mj NA other upstream 179427 17038419 ~ 17040830 (+)
G28982 NA other upstream 745876 16473898 ~ 16474381 (+)
G28899 NA other upstream 1234531 15985219 ~ 15985726 (+)
G28891 NA other upstream 1378402 15841372 ~ 15841855 (+)
cdkn1d LOC107699204,LOC107719868,LOC107562144,LOC107601015,LOC107758204,LOC107687563 other upstream 1564979 15565499 ~ 15655278 (+)
G29526 NA other downstream 1079799 18300415 ~ 18301189 (+)
G29545 NA other downstream 1215844 18436460 ~ 18461317 (+)
G29642 NA other downstream 1662563 18883179 ~ 18886402 (+)
G29814 LOC107660256 other downstream 2069604 19290220 ~ 19342911 (+)
G29835 NA other downstream 2510646 19731262 ~ 19786128 (+)

Expression


Co-expression Network