G29544


Basic Information

Item Value
gene id G29544
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18435643 ~ 18460595 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU43755
gagttatgtattgacattttgcaactttgatccttcagttacagcttccatcgggtgccaggctttgtcagcctgatgagaacggaatgttggagttaaatgttgacagttatgcacctgtggccttttagtttcagtttgattcttggtcataacatggcctccgtagaatactgatagggccaccggaagaatctgaaggagtgaagattctgacgcacaagaaatgtggccaattgttttcatttactgtatcttgtcctttcctctataaataaagtgacttgcgatctgagcgtCGGAGGAGGCAAagtCGGAGGAGGCAAacggaggaggcaaagcagggaaggaggcagaaggcgggggcctgcccggcccccggcctcaggcggactgagatccgtctggagacaaaagggaggttaaggagaaacctgcttctctcccgcttgcaatcgacagcacaatctttgcaagccttaaaatccataaaaacctgtcttgtgttttatttcgccttgagttgatccttcctggtaaagagccgtttgagtgaaatagtctcaacatttacttggtccttcgagccggatcccaacacgacagagcggaggaggagaggacgaagaggagccgagagacagtctctgatcagagccaggcaatagctgcctgcaaaaatccacccgcgtgaattcgaggggggtcggtgattcttcgtctggaaaaatcaacttctccgggctgtctgacgggagccgttggaaggacaactcaacgcactgatcaggtgatataccggtattgtttttatggctgaagtatgtggatgagactgcagtataataggtaccggctcgagttcgtagccagtgatttgcctgttaaggtgaaggatctgtatcgacagtgaagccaagattactagctgctttggaagcacagtaatctcgacaga

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43755 True 958 lncRNA 0.49 3 18435643 18460595

Neighbor

gene id symbol gene type direction distance location
LOC122343129 LOC107565648,LOC107660365,LOC106563294,LOC108274068,LOC107733731 coding upstream 213323 18218716 ~ 18222320 (+)
lman2la lman2l,lman2la,LOC107660366,LOC107565653,LOC102299173 coding upstream 224750 18202735 ~ 18210893 (+)
ddx54 ddx54,LOC107729212,LOC107745378,LOC107674901,LOC107597958,LOC107566861,LOC102784149 coding upstream 437985 17984993 ~ 17997658 (+)
abl1 abl1,LOC107670387,LOC107597931,LOC107674916,LOC107566858 coding upstream 472124 17939684 ~ 17963519 (+)
exosc2 exosc2,exos2 coding upstream 497727 17933305 ~ 17937916 (+)
rab21 rab21,zgc:154045,LOC107687573,LOC107690748,LOC106609839 coding downstream 86936 18547531 ~ 18554389 (+)
trim24 trim24,LOC107709964,LOC107687572,LOC107747644,LOC107562152,LOC107690747 coding downstream 95974 18556569 ~ 18565366 (+)
LOC122343002 NA coding downstream 158956 18619551 ~ 18627271 (+)
LOC122343000 LOC107554745,LOC107700104,LOC107746770 coding downstream 166830 18627425 ~ 18632437 (+)
si:ch211-166e11.5 LOC107685387,LOC107554747,LOC107712904 coding downstream 173514 18634109 ~ 18646928 (+)
G29484 tbx3a,LOC107742157,LOC107597930,LOC107687999,LOC107728866 non-coding upstream 374727 18059335 ~ 18060916 (+)
G29476 NA non-coding upstream 433164 17999597 ~ 18002479 (+)
G29320 NA non-coding upstream 469892 17884328 ~ 17965751 (+)
G29364 NA non-coding upstream 503239 17931884 ~ 17932404 (+)
G29318 LOC107745315,LOC107597934 non-coding upstream 512754 17916054 ~ 17922889 (+)
LOC122343196 NA non-coding downstream 130852 18591447 ~ 18594116 (+)
G29591 NA non-coding downstream 139833 18600428 ~ 18603316 (+)
G29600 NA non-coding downstream 202265 18662860 ~ 18665083 (+)
G29627 NA non-coding downstream 324450 18785045 ~ 18785246 (+)
G29633 NA non-coding downstream 354288 18814883 ~ 18815278 (+)
G29526 NA other upstream 134454 18300415 ~ 18301189 (+)
atp5mj NA other upstream 1394813 17038419 ~ 17040830 (+)
G28982 NA other upstream 1961262 16473898 ~ 16474381 (+)
G28899 NA other upstream 2449917 15985219 ~ 15985726 (+)
G28891 NA other upstream 2593788 15841372 ~ 15841855 (+)
G29642 NA other downstream 422584 18883179 ~ 18886402 (+)
G29814 LOC107660256 other downstream 829625 19290220 ~ 19342911 (+)
G29835 NA other downstream 1270667 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 1285139 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 1577338 20037933 ~ 20043453 (+)

Expression


Co-expression Network