G29600


Basic Information

Item Value
gene id G29600
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18662860 ~ 18665083 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU43851
TACGTGTTAACAGATATAACTTTTATTGTTGCAAGTACATTTACAAATCttactttttcagaattatattttaaatagcataatacatttgtaaaacatAGAAACGAGCAATACACGAGTGGATATAATGTTTTCACCTTCCCCGCTCGGGTTTCAAATGTAGTAATTCACAGTAGAAGTGATAGCTTCAGTGTGCAAGTGATTTCAGCTTTACTCCCAAACACAGGGCCAGCTCACTCTTCTGAATCATCCCGTCTTTATTCACATCGCAGTGGAGCAGCAGAACCTCGCGCAGTTTATCCAGATCCCTTCCACTGATACTTGGctgagagaaagaagaaagtggTGGAATACAGAGGAAAGTGACAATTATTAGTTGTATCGTAGCAGGCTTTTGCGTTTTTTAATCAGtcaatacataaatacattctgGTCTACAGCGCAAGCTATAAAGCTTAAGTTCTTTGACCCTACTCCTGGGGAccctgcaaagttcagctccatcCTGGATCAAACACCCGAGGCCGGCTATTTGAGGTCTTCACCATGAAAATAAACTTTCCAGGACGGTGGGTCCCCAGGATCAGGTTTAAAGACCTACGAGTTACGCGTTTAATACTGAAGGTTATGGACCCAAATagattaaaacaagaaaatgaaaatttagcAGTAGCTAATTCCTTAGAATCTGTCAGAGACGTGCAAGTTCGGGTTTGTTAGAAATCTCGAGACTTATAGCGTAGTCGCTTACCCTGACGAGCTCCATCATGTCTTTGACAAACCCATCCACCTCTGGTCCTTCAAGGGCTCCGGTCTTGCTCTAGAAAGAGAGCCGAACTTTTAAGAGCTGGAACTGCTTTGTCAGTGCGTTAGGTTTGTGATCCGTGAGGTTAGCTGATTAGCGCGTCTGCTTAGCCGCCTTTGCTATTAGCAGTTTTGGAAAGTTTGGGATTTTTGGTTTGCCAATGACCAGTTCTGTCGTGACTCTCAGCGGTATCGATAGATTCAGGAGAGAACCGTGAGACATTCGAAAAATCACAGAATCGGTCTATTAATCAATTTAGCGTTACACCGCTAATGTTAGAtgtatacaggtggagctggggaaggtggagggctTCTGAACCATTTGATGATATCATTACGTCAGATTGAGTTTGATCTGTCGAACAGCACCAACTAGAGTCTCATGCCAGAATGTTGGATTTCTTTCTATTTGAGGGCTTTAAAAATTGGGCTTTCAACCGGTAGTTTTTAACAACAGTAGCAAGGTTAAATCATTCTTACAACATCATAATGCGCAAAGATCTTCTCAAAGTCTCTGTTTCTCTCCTCTTGACTGTCGTCCTGAAGAAGGCAGGAAATAAAGGGGGCATCATGCATTTGCTTgcagcaaattattacatttagaatCACAAAAGGTTAAATGAATTAGATAGAAATTACTAACATCCATTTTGAACTGCAAAAGGAAGTTGTCTTGCAGAGCCAGAATTCTGGGGAGGATTAACATCGAACTGGCTTGAGGTGATTTACGACACTGTTGCCTTCTGTAGGTCTGTTTTATCTCAATTTGAGCTAATCTATAACTATTGGATTTTCCATTAAAGAACGCTACCGTGAAGCTGCTTTGAGGCAATCTTGACCTGAATGGTGCACTTTACTGCCATCAAACTTTCTCAAATTTGTTGTCACTACACCACAATGATAATTTCACATGCCTGAACCCAGACAGCCCATGTacgtctgcaagatgtctgttaaagatctctttGGCTGTCCACAGACGTCTTGCGGATGTCGGTTTCACGTACATTCTAAATcctaaacatcttaaagacatctaatagACGTCTATTTGACATCTAAAAGGAGACGTCCAATAGATGATAAATATAGAGTATTAATTTGTCAGCTGTGTGTTTCTGCCAGCCAATCTACACTGATTCTAATACGTGACTGATTCGACTTAGGCAGCACAAATCATACAAACGTTAAACAAGCCAGCATAAATATACTTCTTGAATTAATAATGTGTTAGAAAAGAGTCTTTGTTTTTAACACAATCATACACACAAAGACCCATTCTCACCATCAAGGCCTAAAAAGCTCCACAAGCACAGAACAAAACCACTATTGTTAACTGTTACATTACAATTAACGCAAGTTATGTAACCGGATTACTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43851 True 2188 lncRNA 0.40 2 18662860 18665083

Neighbor

gene id symbol gene type direction distance location
LOC122342234 LOC107685386,LOC107554769,LOC107712902 coding upstream 7755 18646798 ~ 18655105 (+)
si:ch211-166e11.5 LOC107685387,LOC107554747,LOC107712904 coding upstream 15932 18634109 ~ 18646928 (+)
LOC122343000 LOC107554745,LOC107700104,LOC107746770 coding upstream 30423 18627425 ~ 18632437 (+)
LOC122343002 NA coding upstream 35589 18619551 ~ 18627271 (+)
trim24 trim24,LOC107709964,LOC107687572,LOC107747644,LOC107562152,LOC107690747 coding upstream 97494 18556569 ~ 18565366 (+)
LOC122342235 LOC107685875,LOC107749047 coding downstream 93471 18758554 ~ 18782810 (+)
LOC122343102 LOC107747636,LOC107554732 coding downstream 140367 18805450 ~ 18809963 (+)
LOC122343011 NA coding downstream 145777 18810860 ~ 18814594 (+)
LOC122342961 NA coding downstream 158842 18823925 ~ 18832593 (+)
LOC122343055 LOC107554755,LOC107730198,LOC107663244 coding downstream 200770 18865853 ~ 18869783 (+)
G29591 NA non-coding upstream 59544 18600428 ~ 18603316 (+)
LOC122343196 NA non-coding upstream 68744 18591447 ~ 18594116 (+)
G29548 NA non-coding upstream 197023 18441631 ~ 18465837 (+)
G29544 NA non-coding upstream 202265 18435643 ~ 18460595 (+)
G29484 tbx3a,LOC107742157,LOC107597930,LOC107687999,LOC107728866 non-coding upstream 601944 18059335 ~ 18060916 (+)
G29627 NA non-coding downstream 119962 18785045 ~ 18785246 (+)
G29633 NA non-coding downstream 149800 18814883 ~ 18815278 (+)
LOC122343164 NA non-coding downstream 238152 18903235 ~ 18907824 (+)
G29777 NA non-coding downstream 267236 18932319 ~ 18932690 (+)
G29797 NA non-coding downstream 302304 18967387 ~ 18967714 (+)
G29545 NA other upstream 201543 18436460 ~ 18461317 (+)
G29526 NA other upstream 361671 18300415 ~ 18301189 (+)
atp5mj NA other upstream 1622030 17038419 ~ 17040830 (+)
G28982 NA other upstream 2188479 16473898 ~ 16474381 (+)
G28899 NA other upstream 2677134 15985219 ~ 15985726 (+)
G29642 NA other downstream 218096 18883179 ~ 18886402 (+)
G29814 LOC107660256 other downstream 625137 19290220 ~ 19342911 (+)
G29835 NA other downstream 1066179 19731262 ~ 19786128 (+)
LOC122343071 NA other downstream 1080651 19745734 ~ 19750074 (+)
LOC122343063 NA other downstream 1372850 20037933 ~ 20043453 (+)

Expression


Co-expression Network