LOC122343071


Basic Information

Item Value
gene id LOC122343071
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 19745734 ~ 19750074 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44230
ATAAGAGTCAGATGTGTCTGCTGGGACTCGTTCTCTCTGCACTTCTCACAGgTACCGGTGGAGCGCGTGATACTCATGTGTTCTGCAGTTCTGGTGAAAATGTCAGTCTGCCCTGTAATAATGCTCTTTTTGGCTGTACATCAACTGCATGGATGTATAGCAAACAATCAGGGACAGTTGAACTGATTTAtggaggaaaaaagaagaaagacatagAGAGATCTGAGAGACTGAGTCTGGGCTCTGACTGCTCTCTGAACATCACTAAAGTCACGAAAGAAGATCATGGATCTTACATCTGCCGGCAATTTGTGACTGGAAAACAAGGAAAGAATGAACAACAAGGAAATGATTCACGCGTTTATCTGCATTTTCTTCATGtcACTTCATCCTCCTCTCAGATCAGTCCAGGCAGctctgtgactctctcctgTCAGTTGTATTGTGATCTAATCTCTTGTGATTCTTTGGTCCGTGATGAAGTTCAGCTGATCTGGGTGAATCAGTTTGGTGTGAATCTACAGACAGACTCCAGATATCAGATCTCATTCTCCTCAGAACACTGTAACATCTCTCTGACTACAAAACTCCAGAATGAAGATCTCAACAGAGAGTGGAGATGTGAGGTTACTCAGAGAAATCAACCGAAGACCTCGG
>XM_043237387.1
ATGGCTGATAAGAGTCAGATGTGTCTGCTGGGACTCGTTCTCTCTGCACTTCTCACAGgTACCGGTGGAGCGCGTGATACTCATGTGTTCTGCAGTTCTGGTGAAAATGTCAGTCTGCCCTGTAATAATGCTCTTTTTGGCTGTACATCAACTGCATGGATGTATAGCAAACAATCAGGGACAGTTGAACTGATTTAtggaggaaaaaagaagaaagacatagAGAGATCTGAGAGACTGAGTCTGGGCTCTGACTGCTCTCTGAACATCACTAAAGTCACGAAAGAAGATCATGGATCTTACATCTGCCGGCAATTTGTGACTGGAAAACAAGGAAAGAATGAACAACAAGGAAATGATTCACGCGTTTATCTGCATTTTCTTCATGtcACTTCATCCTCCTCTCAGATCAGTCCAGGCAGctctgtgactctctcctgTCAGTTGTATTGTGATCTAATCTCTTGTGATTCTTTGGTCCGTGATGAAGTTCAGCTGATCTGGGTGAATCAGTTTGGTGTGAATCTACAGACAGACTCCAGATATCAGATCTCATTCTCCTCAGAACACTGTAACATCTCTCTGACTACAAAACTCCAGAATGAAGATCTCAACAGAGAGTGGAGATGTGAGGTTACTCAGAGAAATCAACCGAAGACCTCGGTCACGTATACTGTCAAGTATTCAgCTGCAGTCGATTCAACAAAACCGCTCCCAGTCAAGAATAAACCAAGACAAACTACACGACCAGCTGCAGTCGATTCAACAAAACCGATTCCAGTCAGCAGCTCCGAGAAGAAACCAAGACAAACTAAACCAGCAGCTCAAGATGCAGCTGATAGCGCGTGTAAGACGTATACGTTATTCAGAGTCATTGTGATTATTGTTGAGATCGCAGTGTTCGTTGCTCCTACTGTCGTTCTTCTTCAGATCAGCTGTGTTAAAAGAGCTGGCAGGAAGATCTCTCGCCACCCAGAGGAAATAGAGATGCCTACAGTATTACAATAACGTACTCTCATAATACtacttattttcatatttgtagatATACGCATACAGCTTTCGGTGTTATTTTTACAgcgctttttattttacagaatgctttaaatattaaataaaccgATACATGTGCGATTATTTacgcaaaaatgtatttttatatttaaaataaattaaatttaagtgttttattgatcca
>XM_043237388.1
ATGGCTGATAAGAGTCAGATGTGTCTGCTGGGACTCGTTCTCTCTGCACTTCTCACAGgTACCGGTGGAGCGCGTGATACTCATGTGTTCTGCAGTTCTGGTGAAAATGTCAGTCTGCCCTGTAATAATGCTCTTTTTGGCTGTACATCAACTGCATGGATGTATAGCAAACAATCAGGGACAGTTGAACTGATTTAtggaggaaaaaagaagaaagacatagAGAGATCTGAGAGACTGAGTCTGGGCTCTGACTGCTCTCTGAACATCACTAAAGTCACGAAAGAAGATCATGGATCTTACATCTGCCGGCAATTTGTGACTGGAAAACAAGGAAAGAATGAACAACAAGGAAATGATTCACGCGTTTATCTGCATTTTCTTCATGtcACTTCATCCTCCTCTCAGATCAGTCCAGGCAGctctgtgactctctcctgTCAGTTGTATTGTGATCTAATCTCTTGTGATTCTTTGGTCCGTGATGAAGTTCAGCTGATCTGGGTGAATCAGTTTGGTGTGAATCTACAGACAGACTCCAGATATCAGATCTCATTCTCCTCAGAACACTGTAACATCTCTCTGACTACAAAACTCCAGAATGAAGATCTCAACAGAGAGTGGAGATGTGAGGTTACTCAGAGAAATCAACCGAAGACCTCGGTCACGTATACTGTCAAGTATTCAgCTGCAGTCGATTCAACAAAACCGATTCCAGTCAGCAGCTCCGAGAAGAAACCAAGACAAACTAAACCAGCAGCTCAAGATGCAGCTGATAGCGCGTGTAAGACGTATACGTTATTCAGAGTCATTGTGATTATTGTTGAGATCGCAGTGTTCGTTGCTCCTACTGTCGTTCTTCTTCAGATCAGCTGTGTTAAAAGAGCTGGCAGGAAGATCTCTCGCCACCCAGAGGAAATAGAGATGCCTACAGTATTACAATAACGTACTCTCATAATACtacttattttcatatttgtagatATACGCATACAGCTTTCGGTGTTATTTTTACAgcgctttttattttacagaatgctttaaatattaaataaaccgATACATGTGCGATTATTTacgcaaaaatgtatttttatatttaaaataaattaaatttaagtgttttattgatcca

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG:

id description
ko04530 Tight junction

RNA

RNA id representative length rna type GC content exon number start site end site
TU44230 False 657 TUCP 0.44 3 19745741 19747442
XM_043237387.1 True 1198 mRNA 0.41 8 19745734 19750074
XM_043237388.1 False 1135 mRNA 0.41 7 19745734 19750074

Neighbor

gene id symbol gene type direction distance location
LOC122342253 NA coding upstream 39407 19703899 ~ 19706327 (+)
LOC122342246 NA coding upstream 295901 19445561 ~ 19449833 (+)
LOC122342242 NA coding upstream 477684 19265355 ~ 19268050 (+)
LOC122342239 NA coding upstream 595099 19147001 ~ 19150635 (+)
LOC122342238 NA coding upstream 677851 19064025 ~ 19067883 (+)
LOC122342262 NA coding downstream 293681 20043755 ~ 20045999 (+)
trnam-cau_2 NA coding downstream 312580 20062654 ~ 20062727 (+)
trnam-cau_3 NA coding downstream 314488 20064562 ~ 20064635 (+)
trnam-cau_4 NA coding downstream 316394 20066468 ~ 20066543 (+)
trnam-cau_5 NA coding downstream 318299 20068373 ~ 20068448 (+)
G29831 NA non-coding upstream 53126 19686857 ~ 19692608 (+)
LOC122343203 NA non-coding upstream 232139 19513073 ~ 19513595 (+)
LOC122343198 NA non-coding upstream 330751 19414461 ~ 19414983 (+)
LOC122343189 NA non-coding upstream 339275 19405903 ~ 19406459 (+)
LOC122343175 NA non-coding upstream 373845 19369771 ~ 19371889 (+)
G29844 NA non-coding downstream 120346 19870420 ~ 19870915 (+)
G29850 NA non-coding downstream 228246 19978320 ~ 19978626 (+)
G29852 NA non-coding downstream 230415 19980489 ~ 19980723 (+)
G29854 NA non-coding downstream 231850 19981924 ~ 19982894 (+)
G29857 NA non-coding downstream 250993 20001067 ~ 20157523 (+)
G29814 LOC107660256 other upstream 402823 19290220 ~ 19342911 (+)
G29642 NA other upstream 859332 18883179 ~ 18886402 (+)
G29545 NA other upstream 1284417 18436460 ~ 18461317 (+)
G29526 NA other upstream 1444545 18300415 ~ 18301189 (+)
atp5mj NA other upstream 2704904 17038419 ~ 17040830 (+)
LOC122343063 NA other downstream 287859 20037933 ~ 20043453 (+)
LOC122342270 NA other downstream 594272 20344346 ~ 20346724 (+)
G29921 NA other downstream 617601 20367675 ~ 20368816 (+)
G29961 NA other downstream 946598 20696672 ~ 20706846 (+)
G30058 NA other downstream 1368488 21118562 ~ 21142831 (+)

Expression


Co-expression Network