LOC122343063


Basic Information

Item Value
gene id LOC122343063
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20037933 ~ 20043453 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44267
GCCTCCGCGTCTGCGACTCGGCTGAAGGAAAGGAAAGATCGTCTGAGATCCGTGttataaaaatggcttttattaaagaggagaccGAAGACGTGATCGTAGAAACGTCGAGAGTCAAGCATGAAGATACCGAGGAACAAACGGaCTCGAGGCTGCTGAAAAAGGAGAGTCAAAAACTGACTGAAACAACAGATAAAGTTCAGTACGAAAAACGTGATTTCATAACCGGAGAGAAGTTTAGTTGCTCACAGGCTAAAAAGACCACTCGGGAAAAAACTAGAGGTACCTTGACCTGCCAAGAGTGTGGAAAGAGTTATAGTAAAAAAGGAAGCCTTAAAGTCCATATGAGGTCTCACAGTGGAGAAAAACCTTACACCTGCCCacagtgtggaaaaagtttcTCCGTTAAAGGAAACCTTGAAGTCCATATAAGGATTCACACGGGAGAAAAACCCTAttcctgccaacagtgtggaaatgGTTTCACTAAAAAGGAAAACCTCAAAGTCCACAAGATaactcacaccggagagaagccttacagCTGCCAACAGTGTGAAAAAAGTTTCAGTAAA
>XM_043237373.1
GCTGCGCCTCCGCGTCTGCGACTCGGCTGAAGGAAAGGAAAGATCGTCTGAGATCCGTGttataaaaatggcttttattaaagaggagaccGAAGACGTGATCGTAGAAACGTCGAGAGTCAAGCATGAAGATACCGAGGAACAAACGGaCTCGAGGCTGCTGAAAAAGGAGAGTCAAAAACTGACTGAAACAACAGATAAAGTTCAGTACGAAAAACGTGATTTCATAACCGGAGAGAAGTTTAGTTGCTCACAGGCTAAAAAGACCACTCGGGAAAAAACTAGAGGTACCTTGACCTGCCAAGAGTGTGGAAAGAGTTATAGTAAAAAAGGAAGCCTTAAAGTCCATATGAGGTCTCACAGTGGAGAAAAACCTTACACCTGCCCacagtgtggaaaaagtttcTCCGTTAAAGGAAACCTTGAAGTCCATATAAGGATTCACACGGGAGAAAAACCCTAttcctgccaacagtgtggaaatgGTTTCACTAAAAAGGAAAACCTCAAAGTCCACAAGATaactcacaccggagagaagccttacagCTGCCAACAGTGTGAAAAAAGTTTCAGTAAAAAAGGGATCTTTAAAAGGCACCTGAAAATTCACGTTGAAGATAAGCctttcacctgccaacagtgtggaaatgGTTTCATTCAAAGCGCAGACCTTAAAAtccacatgagaattcacaccggagagaagcccttcaTGTGCGCTCACTGCGGAAAGCGTTTCACGCGGAAACAAAGCCTTAAAGGCCACATAAGAACTCACACAGGAGAGAAACCTTActcctgccaacagtgtggaaggAGTTTCACCGAAAAAGGAAACCTCGAGGTCCACAAGAAaactcacaccggagagaaaccttacaCCTGCCCGCAGTGTGGGAGAAGTTTCGTTAAAAAGACCGACTTCGAAAGGCACATAAGAGTACACACGGGAGAGAAGCCTTAtgcctgccaacagtgtggaaagagcttttCGCAGCAGGGAAGCCTCAATGTCCACAAGAGGATTCACGCCGAAGAGAAACCTTCGAGCCACGCGAGGATTCACTTGATTGAAGGATTTTACGTTATCGCTGAGGAAGGTGTTTCACAGACGGGAAACATCGTAAGAATCGTTGACGCTTAGTGCTCATGCGGGTTAAAATTGTTTGCTTGTCTTTAGAGTTCGCTCAACAAAAGTTGAAAATGATACCATGCCTCACTGTCAAGCTCTGCGCATGTGACTCCGTTTTCTCTGATGAACCCAtggttatgtaaaaaaaaactaaacttggCTCTTCTAAGCTTTAGAATTGGAACggatgggtttttttgttaaacagtCCGAAAGGAGTCCAATAAAGCGCATCcatccataataaaatgtgcctcGCTGGAATCAAGGCCTTCTGGAacaaatctgtgtgtttttgtaagaatAAGATGTGCATTTAAAACGTTTGCGAAAGCCATTTAGATGCAAGATGCGTGTTTTGACTTcgtaatttaatgtatttaggtatttaatgtattaatgtattcgTAATTTAATGTATTAGTATAAGTACTTTGACTTTTTCAGATTGAAGTCCTCAAACAGCCAATTATTGAAAAGGTACTTGGAGAGTTCTCGAATGCTTTAATGGCAGTATATATGGACTAagtattaatttgtgttccgtAAAAGTTTTTCTTGAAAAATGAACGATGCCGTGGATCTGATACACATTGGCTCTGTAAGAATCGCGGTCTCGCGATATCGATAaaagttgattttgttttaaaacgttTCGGACTGATTGCATAGCTAGATTTGTCACGTATAACATCGAAAAACCCACGCTGGCGCAGAAAATGTCAACGTTTTTCTATATGCGATTTGTGTACATCGCAATTTCAACGTTAAAAGTACCCTGAAGGAATTTTTATGTggccaaatattaaaatcacgtggatttaaaagtaaaacgAAACCTCGCCACACTGTTGGCGCCCTCTGCAGGTGTTTGTTATAATACATGATGCGAGTAGGTTATATTCATGTTACGTATAAACATCTTACGTTATGTAGTCTATTTAAAAAGTGCTTAGTAAAATTGTGTGATTACTTGGATTTGAATTATTGTCTCATTGCAAATTTGAGATATAAAAAATGTagtcaatattaatttttattagacTACTAAAAATATCGGATTACtcaattgttaaaataatcagtATTACTTGATTACCCAGATGATTATTAGTTACAGCTTTAGATTAGTTGTTAAAtgcgttgtttttttttgcaatttaaaaggCAAATGGTTTATTGAAAATTTATTtgtaccattttatttatttattaaaatgtgaaagacGGTAACGACATTGCTATCTCTAATTTTAGTCCTTGAAAAcggaaaaaaaactcaaaagttcGTTTTGATACGCTCTAGAATGACGGAAGACGCAAGTCTGGGAAGAAGAATGGTATagaaattgttattattgttttccttGCATAAAAAAGGTATTCTCACTGTGTCACAAATGTGGAGTTGAGCCGCTGATGTCCCATGAActgttttacagatgtttttatgtttctggAGATGAGAACATTTCAGTCGTTTCAAAGATGAACATGGGTCTCAACATGTGGGTGAGTTAATGgcatagttttcattttagggtaGACTGACGAAGTGCAGTGACCACATATATCCAGCAGTGGTCCGTAGAGACCACTAGAGTTAGTTTAGTCCACTGTAAGTATGTTGACTGAGTCTGGCGTGTTCGTTCACCTTTGTTGCtaaaattacagaaatactGGAAAAAACTTTCATGTTGCATTACCTGACTTCAATAGCAAACATTgcataacataaaatgtaaccAAACAAACCCCTAACTCGAGAGAACTTATTAATTATAGACAAATTTACAGAAGGAGAAAGGAGAAACCATACTTTTGAACAACTTTGGTCAGGAATCAAGCCCCACCAATCATGTTAGAGCTTCTCGTTTTGTTATTGAATCATGGAGTGCCACAGGGCTCAGTATTAGgtccttttctttttatgctTGTACTTTCCCTCTGATAGACAGCTGTTCCCGTTCAATAAACCGTAAAAAAAGTGCAATCAGTGCACGGATGTTTTTGCAGACAATACATACTTCACCGAATTCTGTTATACCACAATTCATTTCAGATATAAGAACAATAAACATAGGGATAACCGAAACTATAAAGCACTTACTCGTGTACATGAGAATaattaacacacaaacacacataaaacctTTGTCATTAGATAAAGCATTTCAGTGTTACATTAGTCACTAATTTATTcgaatatatagttatttaaacacttaaacCAATAAAGCGCACACCTTTCCTACAGCCGAATTTCGTTCGACTTTGCGGTATATAATTTCTCTCAAAATgtgattataatatataacagaaattctaaataatcatttataaataataacaaaacaacaaaaatttcAAGAAGAAACTATAGCggttttagcatagcttagcatagatcattgaatctgattagaccagtagcatctcgTTTAAAAGGGACCAAAGAGTGTGTCATTTTTTAGCACaatttcaaaacaaactttGCGGTCCAAACTGTTGAAAATTGCACTTTTCCCACAGAGCAAACAACACAAATACGTCAAACATGTTCTTAGGTtctcaaaaaaaacccaaaaaacacacacgtcaCATGTTTTTCTTATGGATGTACTTCTAaagatcagttttttttcttaaattggTTTTTGTGAACAATTTTGCAGCAATCAAAATACGATATCTTAAAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44267 False 575 TUCP 0.43 3 20037938 20040195
XM_043237373.1 True 3838 mRNA 0.37 3 20037933 20043453

Neighbor

gene id symbol gene type direction distance location
LOC122342253 NA coding upstream 331606 19703899 ~ 19706327 (+)
LOC122342246 NA coding upstream 588100 19445561 ~ 19449833 (+)
LOC122342242 NA coding upstream 769883 19265355 ~ 19268050 (+)
LOC122342239 NA coding upstream 887298 19147001 ~ 19150635 (+)
LOC122342238 NA coding upstream 970050 19064025 ~ 19067883 (+)
LOC122342262 NA coding downstream 302 20043755 ~ 20045999 (+)
trnam-cau_2 NA coding downstream 19201 20062654 ~ 20062727 (+)
trnam-cau_3 NA coding downstream 21109 20064562 ~ 20064635 (+)
trnam-cau_4 NA coding downstream 23015 20066468 ~ 20066543 (+)
trnam-cau_5 NA coding downstream 24920 20068373 ~ 20068448 (+)
G29854 NA non-coding upstream 55039 19981924 ~ 19982894 (+)
G29852 NA non-coding upstream 57210 19980489 ~ 19980723 (+)
G29850 NA non-coding upstream 59307 19978320 ~ 19978626 (+)
G29844 NA non-coding upstream 167018 19870420 ~ 19870915 (+)
G29831 NA non-coding upstream 345325 19686857 ~ 19692608 (+)
LOC122343176 NA non-coding downstream 144531 20187984 ~ 20189971 (+)
G29883 LOC107723241,LOC107659605,LOC107550566 non-coding downstream 223383 20266836 ~ 20270112 (+)
G29918 NA non-coding downstream 280227 20323680 ~ 20442006 (+)
LOC122343173 NA non-coding downstream 394212 20437665 ~ 20438508 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding downstream 397095 20440548 ~ 20443225 (+)
G29835 NA other upstream 251805 19731262 ~ 19786128 (+)
LOC122343071 NA other upstream 287859 19745734 ~ 19750074 (+)
G29814 LOC107660256 other upstream 695022 19290220 ~ 19342911 (+)
G29642 NA other upstream 1151531 18883179 ~ 18886402 (+)
G29545 NA other upstream 1576616 18436460 ~ 18461317 (+)
LOC122342270 NA other downstream 300893 20344346 ~ 20346724 (+)
G29921 NA other downstream 324222 20367675 ~ 20368816 (+)
G29961 NA other downstream 653219 20696672 ~ 20706846 (+)
G30058 NA other downstream 1075109 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 1125740 21169193 ~ 21174340 (+)

Expression


Co-expression Network