G29883 (LOC107723241,LOC107659605,LOC107550566)


Basic Information

Item Value
gene id G29883
gene name LOC107723241,LOC107659605,LOC107550566
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20266836 ~ 20270112 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44291
GGTCGATGTATTTTTATGTCACTAACTTTAACCACGCATCGCAAATACCAGTTCTCACTTGGGTCACGTTTGCAGTTCCCATTAAGATTAATTTTTAACCACTGTAGAAAAGTTGTGCAAGTTTATGACTGAGATTCCAAGTCTcgtttatttaaaacttgacattTCCGATTGGTCAGATGAGTCCATACATAGCCCACTGTTTTGGATATTCTGATTAATTATCAAAGTAAAGTAGAAAAGGCAGCACGttggaaaaaaaggtacaatatTATGAACACTGACATACGTATgcataaaatagtaaaaaatacaaaagtaccTAAAACATTCGAATGGTAAAAGACTATTAGGCCTATTTTAGACAGaattaaatgcatgaaacaGTTTTTTCATCATTCACATATAGTTTCCTAGCTATAGTCAAACACTATTTATTGTAGCGACATGCATCACATAATAACTGGACACGTGTTTATAGAGAAGACAAACAGTGTGGGAAATGAGAATACTCAAAAGAGTATTATAGGCTTGCTACAGTGAATTGGGAAAAGGCATGAAGATGAATTTGGACACTTGTTTTAATGTAGGATGATATTAAGAGTTTGTATTTGAAATTCACTCGTGAGTACCAATAGCAGCTATGAACGGACACGGGCCAGATTCTGGGTTGTAAATGTTAgcttacattataaaatgtacgAGTCAATCACGGAAGACATGCAGACAGACTTTTGGAAGAGGTCTACAGTGACCTTGTGTAATTGAGCCTGAGGGTGGCACTGTAATGTTGACGGACAGGCTATGTGCACCtgtgcataaaatgtgtttgaagGTTAACTTAAAATTATGGGAATTGGCGAGAGGATAACGAAGCCATGTCAAGTCAATACAAAACATAACGGAACGGTTTACAGCCTATTAACGCAAGCACATTTAAACGAAAGGATTTACACTTTCACTAAAGCCTCCCACCCACTGTTAAAGAAGAGCTGGTTTACTAGTTGCTAAACTGATGCAGACTAAACTCAAAAGTCAAATGTGAGATTTTAATATATCTATCTCACTGGAAGGTTTGAACGATATTAATTGCAAAATGCTACTGAAATACATTTCCGAGTTAAATGTAGGGTTGATTATGCTTACATAAAAGGTTCGTTTTCAAGTGGAGTAATGTTTCGGCCAGGAATTGCCTCTAGAGAGGAGTAAAGCTGGAAAAAAATGATACAGTATCTTCTTCATCCCCACTCATAACCCCACAACAGTATCAGAAATGTCTAGCCATGTCCAAAACATGACTTAAAACTGATCAAGAGCAGTAACCTTATCACAACTGAGACGCCATCACATGACCACCACCTTTTACAGTATCAGATTTTTCTCCAGTATGTATTTCTTGCTTTCGTTTCAATATGGCTGCTTTGGAAATAGGTTTACGGCTATGAAATCTCTTGTGCGATCTTAAATTGCACAgccatttaaatctttttttacacAGAGAACACAAATAAGGTCTCTTGTCTGCGTGACTTTTCAGGTGTATCTCTAAGTGCGATGGCGAAGCGAATTTTTTATTACAACGATAACAATCAAACGGCCTTAGCCCCGAGTGAATGCGCAGATGATTTTTGAAATTGCTCGTTTTCGCGAACTTCTTGCCACATTCAGAACACTGGGATTTCTCTCCAAAATGAGTCTGCAAGTGACTTTTCAGCTGTCTTAGATAGGCGAAACTCTTCTCACACTGAACGCACATGTAAGGCCGGTCTCCGGTGTGAAGCCTCATGTGAGCCGTAAGGTTTCCTTTAAGTGCGAAGCTTTTGCCACAAGGACAGGAGAACGGCttttctccggtgtgaatccGCATGTGAATCTGGAGTTTAGATTTGCTCTCGCAAATCCTCCCACAGTGATGGCACGTAAAAGGCTTCTCATTGGTGTGAACGCTTCTCATGTGACCATTAAGAAGTCCTTTATATCTGAAACTCATTCCACAGTGATGGCAGCTGAAGggcttctctcccgtgtgaAGCCTCATGTGATAATTCAGGAGTCCTTTATGtatgaaactcttcccacactgcGGGCAAGAGAACGGTTTTTCCCCCGTGTGCACTTGTATGTGAATCTTAAGGTTTGATTTGCTCTCGCAAATCCTTCCACAGTAATGGCACACGAAAGGCTTCTCCTCGGTGTGAATGTACCTCACGTGGCGGCTGAGCTGTCCTTCGAGAatgaaactctttccgcactgaaGGCAGGTGAAAGGCCTTTCTCCGGTGTGAAGCCTCATGTGGTAATTGAGGGACGTTTCGTGTTTTAGACACTTCCCACACTGGTGGCACTTGAAAGGCTTCTCCTCGATGTGACATCTCATGTGCGCCTTTAGGTTGTTTTTTATCTGGAAACCCTTTCCACATTGCTGGCACTtgaagggcttctctccggtgtgaattaTCACATGCCTGTTGAGGCGTTCTATGTCTTTgaaactttttccacactgGTGGCAGATAAAATGGCTCTCTCTTAAGTGAATTCTCTTGTGCAAATTAAGGGTTACTTTATGTatgaaactctttccgcactgatCGCACTTGAAAGGCCTTTCCCCCGTGTGGATTCTCATGTGATCCTTTAAGGTCTTGCTTCGAGTGtaactctttccgcactgatCGCATttgaaaggcttctctccggtgtgaattctcatgtggtTTTTAAGGCTTCCGTTCGTAGTGAAAACGTtcccacactgttggcaggtgaagGGGCACTGCACACTGTGCATTAACTCGTGTTTTTTAAGGCTTTTTTCATAAGTGAAATTCCTGCCACATTGAGGGCAGAtgtaacagtttttaaaacttttctttcgAGGCTTTTTTTGTGAGGGCTCCTTTTCAAGCTTTTCTATGTGGTGTTTATCGTATGGATCTTCTTCCTCCATTTCATACAGTTCTTGACTCTCCACTTTCATCACCACTAGGTCTAaggtggaaaaaagaaaaatacaagtGAACTcagtaaaatgacattaaacaactatatttattaaattactaaatgctattttttccattatcatattaattgcaaataatcaTGTCTAGATTCCTGCAGCAGTTACATTAAGGTGATTTTCAATTTTGGGGAGcaactagttacatgtaacgtaattgcataattaaaa

Function

NR:

description
PREDICTED: TP53-regulating kinase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44291 True 3193 lncRNA 0.40 2 20266836 20270112

Neighbor

gene id symbol gene type direction distance location
LOC122343930 NA coding upstream 18607 20248111 ~ 20248229 (+)
LOC122342265 NA coding upstream 82338 20183653 ~ 20184498 (+)
trnam-cau_25 NA coding upstream 159709 20107054 ~ 20107127 (+)
trnam-cau_24 NA coding upstream 160481 20106282 ~ 20106355 (+)
trnam-cau_23 NA coding upstream 162385 20104376 ~ 20104451 (+)
LOC122343026 NA coding downstream 106298 20376410 ~ 20378106 (+)
LOC122343110 NA coding downstream 121353 20391465 ~ 20392374 (+)
LOC122342274 NA coding downstream 173234 20443346 ~ 20446136 (+)
LOC122342275 NA coding downstream 198114 20468226 ~ 20469061 (+)
LOC122343122 NA coding downstream 200558 20470670 ~ 20476708 (+)
LOC122343176 NA non-coding upstream 76865 20187984 ~ 20189971 (+)
G29857 NA non-coding upstream 109313 20001067 ~ 20157523 (+)
G29854 NA non-coding upstream 283942 19981924 ~ 19982894 (+)
G29852 NA non-coding upstream 286113 19980489 ~ 19980723 (+)
G29850 NA non-coding upstream 288210 19978320 ~ 19978626 (+)
G29918 NA non-coding downstream 53568 20323680 ~ 20442006 (+)
LOC122343173 NA non-coding downstream 167553 20437665 ~ 20438508 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding downstream 170436 20440548 ~ 20443225 (+)
LOC122343178 NA non-coding downstream 189258 20459370 ~ 20462342 (+)
G29927 LOC107681551 non-coding downstream 226985 20497097 ~ 20497868 (+)
LOC122343063 NA other upstream 223383 20037933 ~ 20043453 (+)
G29835 NA other upstream 480708 19731262 ~ 19786128 (+)
LOC122343071 NA other upstream 516762 19745734 ~ 19750074 (+)
G29814 LOC107660256 other upstream 923925 19290220 ~ 19342911 (+)
G29642 NA other upstream 1380434 18883179 ~ 18886402 (+)
LOC122342270 NA other downstream 74234 20344346 ~ 20346724 (+)
G29921 NA other downstream 97563 20367675 ~ 20368816 (+)
G29961 NA other downstream 426560 20696672 ~ 20706846 (+)
G30058 NA other downstream 848450 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 899081 21169193 ~ 21174340 (+)

Expression


Co-expression Network