G29889


Basic Information

Item Value
gene id G29889
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20145707 ~ 20147299 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44299
AAGAAACGCCCAACCGTGAAGATACAGAGGAGCGCGCGAAGACGGCGTTCGTCAAAGAGGAACGCGAAAACGTGAAGATAGAAGATGCATTCAGAGTCAAACAAGAAGATGAGGAGCAAATAGACCTAATGGCACCGAAAGAGGAGAGGGACGTGTTGAATGAAATTGAGGAGAACGATCAGAACGGGAATCTTCACGATTTCATCAGTGGAGAAAAATCGCTTCGTTCCTTACAGTCCGAAAAGACTGCCACGCGAAAAAGAGCCCAAAAGAAAGGTGCTGGGAATTATTTCACTTGCTTTCAGTGTGGAAAGGCTTTCAATCAGCAAGGAAAGCTTAACAGGCACATGAAAATTCACAACAGCTCTCCTCAGTCTGGAACG
>TU44303
CGCGTCTGCGTCTGTTTCTGATTCGCCCGAAGAAAGGTCTGCGGCGTTTAAGTTTGTAAATCAACGCCAAGTCTTTTGTCAGCGGGAGGGTTTTCAGAAGTTGCTGTAATACTTagttaaattcaaatataacgTTATTTTCGCGAGTAAAGCGCGTCCTCGTATTAATAACAGAAAAGGACAAAGTTTCCAAACACCTAGAAAAACTGCCG

Function

GO:

id name namespace
GO:0000439 transcription factor TFIIH core complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44299 True 383 lncRNA 0.46 2 20145707 20146537
TU44303 False 212 lncRNA 0.42 2 20146614 20147299

Neighbor

gene id symbol gene type direction distance location
LOC122342264 LOC107572684 coding downstream 62 20145055 ~ 20145645 (-)
trnal-cag_24 NA coding downstream 37968 20107657 ~ 20107739 (-)
trnal-aag_24 NA coding downstream 38748 20106877 ~ 20106959 (-)
trnal-aag_23 NA coding downstream 39520 20106105 ~ 20106187 (-)
trnal-cag_23 NA coding downstream 40648 20104977 ~ 20105059 (-)
LOC122343109 NA coding upstream 636 20147935 ~ 20150658 (-)
LOC122343134 NA coding upstream 9856 20157155 ~ 20160273 (-)
LOC122343114 NA coding upstream 17410 20164709 ~ 20166414 (-)
LOC122342268 NA coding upstream 94316 20241615 ~ 20251885 (-)
LOC122343064 LOC107723244,LOC107659594 coding upstream 116361 20263660 ~ 20266849 (-)
LOC122343174 NA non-coding downstream 1219 20142703 ~ 20144488 (-)
G29853 NA non-coding downstream 164984 19980489 ~ 19980723 (-)
G29851 NA non-coding downstream 165348 19979957 ~ 19980359 (-)
G29847 NA non-coding downstream 169566 19975231 ~ 19976141 (-)
G29849 NA non-coding downstream 172260 19944294 ~ 19973447 (-)
G29900 NA non-coding upstream 5595 20152894 ~ 20153445 (-)
trnal-aag_25 NA non-coding upstream 63257 20210556 ~ 20210638 (-)
trnal-aag_26 NA non-coding upstream 65163 20212462 ~ 20212543 (-)
trnal-cag_25 NA non-coding upstream 65942 20213241 ~ 20213322 (-)
trnal-aag_27 NA non-coding upstream 66950 20214249 ~ 20214332 (-)
LOC122343146 NA other downstream 135995 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 808215 19333729 ~ 19337492 (-)
G29787 NA other downstream 1213832 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 1228174 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 1243155 18898807 ~ 18902552 (-)
G29902 NA other upstream 89838 20237137 ~ 20238554 (-)
G29906 NA other upstream 133807 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 711124 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 901558 21048857 ~ 21053725 (-)
LOC122343113 LOC107749046 other upstream 1128923 21276222 ~ 21279043 (-)

Expression


Co-expression Network