LOC122342270


Basic Information

Item Value
gene id LOC122342270
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20344346 ~ 20346724 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44355
TGAATTCTTTTGTCATCCAGCTGCAACAACCAGtacaaacaacagcaacagctGAGGTTACCACAAATGCTCCAGTGCCTGTCTTTCTCCAACAGATAAAAGGGCTTTCATTTCTTCATGGACTTAAGGCATTTCTAGAAGGCCAACCAAAGGCCCTTGGGACAGTCCAGATAATGATCGGTGTGATGACTTTCCTGTTTGGCATTGTGTCTACAGTTCATGCAGAATCCGTCTTTGTCTTTATTGGTTTACCGTACTGGGGATCTATCACTGTAAGAAACTGTACAGTTTATTGTTCCGTTTTTTATAATACAAGCTGCGGTAGTTAGTCAATCAAAAATGCCTATTACCGCCATGTGTACCTCCATTGCAAGGAAATCACAGTAAatacaaccatttaaaaaaaatcaacaccaCAAAGAGCAAGCGGTGAGCATTACCCAGAACTGTACTACACCTTTAAAATTAAGGTAAATTAATGATCAAAATTATTGGCAGCAATAATAACATGAATGAGAATGtagaattgtaatatttaatcacGACTAATTAGTTACAGtatgttacagtaaaatattacaatgacaGTAGTGC
>XM_043236067.1
TGTCGACTCCTATACCCATGAATTCTTTTGTCATCCAGCTGCAACAACCAGtacaaacaacagcaacagctGAGGTTACCACAAATGCTCCAGTGCCTGTCTTTCTCCAACAGATAAAAGGGCTTTCATTTCTTCATGGACTTAAGGCATTTCTAGAAGGCCAACCAAAGGCCCTTGGGACAGTCCAGATAATGATCGGTGTGATGACTTTCCTGTTTGGCATTGTGTCTACAGTTCATGCAGAATCCGTCTTTGTCTTTATTGGTTTACCGTACTGGGGATCTATCACTATGCCAGTGGTCCGCAGCTCTTCTGTGAACCACCAAGAACCCGAATACTGTAattgtgaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44355 True 594 lncRNA 0.37 2 20344364 20345054
XM_043236067.1 False 353 mRNA 0.44 3 20344346 20346724

Neighbor

gene id symbol gene type direction distance location
LOC122343930 NA coding upstream 96117 20248111 ~ 20248229 (+)
LOC122342265 NA coding upstream 159848 20183653 ~ 20184498 (+)
trnam-cau_25 NA coding upstream 237219 20107054 ~ 20107127 (+)
trnam-cau_24 NA coding upstream 237991 20106282 ~ 20106355 (+)
trnam-cau_23 NA coding upstream 239895 20104376 ~ 20104451 (+)
LOC122343026 NA coding downstream 29686 20376410 ~ 20378106 (+)
LOC122343110 NA coding downstream 44741 20391465 ~ 20392374 (+)
LOC122342274 NA coding downstream 96622 20443346 ~ 20446136 (+)
LOC122342275 NA coding downstream 121502 20468226 ~ 20469061 (+)
LOC122343122 NA coding downstream 123946 20470670 ~ 20476708 (+)
G29883 LOC107723241,LOC107659605,LOC107550566 non-coding upstream 74234 20266836 ~ 20270112 (+)
LOC122343176 NA non-coding upstream 154375 20187984 ~ 20189971 (+)
G29857 NA non-coding upstream 186823 20001067 ~ 20157523 (+)
G29854 NA non-coding upstream 361452 19981924 ~ 19982894 (+)
G29852 NA non-coding upstream 363623 19980489 ~ 19980723 (+)
LOC122343173 NA non-coding downstream 90941 20437665 ~ 20438508 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding downstream 93824 20440548 ~ 20443225 (+)
LOC122343178 NA non-coding downstream 112646 20459370 ~ 20462342 (+)
G29927 LOC107681551 non-coding downstream 150373 20497097 ~ 20497868 (+)
G29945 NA non-coding downstream 284096 20630820 ~ 20631329 (+)
LOC122343063 NA other upstream 300893 20037933 ~ 20043453 (+)
G29835 NA other upstream 558218 19731262 ~ 19786128 (+)
LOC122343071 NA other upstream 594272 19745734 ~ 19750074 (+)
G29814 LOC107660256 other upstream 1001435 19290220 ~ 19342911 (+)
G29642 NA other upstream 1457944 18883179 ~ 18886402 (+)
G29921 NA other downstream 20951 20367675 ~ 20368816 (+)
G29961 NA other downstream 349948 20696672 ~ 20706846 (+)
G30058 NA other downstream 771838 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 822469 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 1021919 21368643 ~ 21761181 (+)

Expression


Co-expression Network