G29961


Basic Information

Item Value
gene id G29961
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20696672 ~ 20706846 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44410
CCAAAAGTGCACACAATACAATCAATGCAGTGTAATAAAACTACAACTATGAAAGTAAAtacatgataaaaatatataaaatacaaaaactaaataattttaacactACAATTTCAGTTTTAGATACATCAATATAATCTGTAAAGGGtctattatacatttacaatatcaacaaaatatTCTGCTTTTGGTAAATAAACAGGGTGCGTTCTCTGCCGTCTCAGTAGCACAGTGATGTTCAGTCTGAAACTGGTCAATAAAATTAACTGTAACTCAGCGAAAACATGACTCACAGACATGAAAGATATCTAAAAGTTAGTATTGTCCAAAACAAATGAGATAAAGTTATCAGTATAAAACCTACACCATGTCCAAAGCGTAAGGATTAATCTAGTTCATACTGTTAGTTTCGGCAAGAAGACAGGAATAACTCTGGATTTACTTCATTAAAGACGAGttgtaaaataacagaaaaaatgtagctgaatgaaatatgaatttacCTCAAGAAGCAATTCACAAGCTAATGCAGCCACTGACTAACCAGTCTAAGGAGTAAGTAATGTTAATCTTTAGTCTACCTGTTATAGTGGCATAAACCTGAACAAATTTATTGGTTTGGTTTTTCCTgaactaaaatatttgtaatcgAGTGATATGTTTTGAACATAACAGGTACTTAATTGTATCTAAATTTCTTAAGACACAATGATAAAACATTCCGACAGGTCGAAGGGACTCAGAGGGGTCCTGAGACACGATGCCagtggagactggcagacccgtggtgAATTCAGCACACCGGCGGTGGGCTCAGAGGGAGAGCAGGAACGTGCGGGAGGGTGGTAATATTTGCAACTCCTCTGGACTTAACACTTGAGGGCACTCTTGAGGAGCAGGGGCTGGGGGGTGCCTATGAGGCGCTGCCATTGAAAAGCACTCTTGAGTAGCAGGCACTGGAGGGCTCTCTGGAAGCGAGGAGCCCCTTCTGGGCTGGAAGGACTTGCAGAGATGAAGGAGAAAGGAATGGGGCAGGACGGAACTCCAGTTCGCTTTCAAAATCTATTAGATCAATTTCTTTCTCTTGTAATCCCACTAGCTGCACTAAATGCACTAGCTGATCACCCTCAGCCATGGTGCAGTGGGCAGAGCTTCTCTCCCTATTCTCGCTGAAGCTCTCTGTTGCCAGCTCTCGCTCCTGGTCTGACGTCATGTGGTTAGGGTAAGAGGGTTTCCTCAACCCAATTCAGTACATCACATGGACTTTACATGATCGCTTTGGAATTTAGCAGGTCTTAAAATCGTGTCATGTATATGAATGGAAGTCAGTGGAGCAAAATGTGCAGTGTGACTGTTAAGCAGCATTTTCATACTCTGTCGAGTCTTGTTTTGCCCTGGCCAACAATTCTGAGCATTCATATCATCCTTCTGCTTCCTTTGTGTATGATTCTGGACCGTTTCTCTACCTCTGATTGCTTGCAGCCTGCCCCTTTGATCCTGTGTGAACTGCCAAAGGTGtgccctccttttgggtctctgaatgtgttccagccaggtgtgaccctggagcacagaaACCTGAacacaaaaggtttttacaactacatttgggatctcattgtctggtctgagtatataaggaaagtgacaaaacacaacaaggcgcgattctgtagccagaccggcccgtagtgtggtgtgtgtccccaTACtccacactatgtactttctcaagaccaggtataatgaccttttaagttttttttattttgtgttatttttgtactgcggaatgttagagttgaatgttgacagttatgcacctgtggcccttttagtttcagtttgattcttggtcataacatggcctccgtataatactgatagggccaccggaagaatctgaaggagtgaagattctgacgcacaagaaatgtggccaattgttttcatttactgtatcttgtcctttcctctataaataaagtgacttgtgacctgagcttcggaggcaaagcaGGCAAAAGCAGGGAGGTTacggagaaacctgcttctctcccgcttgcaatcgacagcgcaatccttgcaagc

Function

GO:

id name namespace
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component

KEGG:

id description
ko04658 Th1 and Th2 cell differentiation
ko04659 Th17 cell differentiation

RNA

RNA id representative length rna type GC content exon number start site end site
TU44410 True 2091 TUCP 0.42 2 20696672 20706846

Neighbor

gene id symbol gene type direction distance location
LOC122342964 NA coding upstream 18763 20655215 ~ 20677909 (+)
LOC122343085 LOC107561645,LOC107566978,LOC107748257,LOC107741456 coding upstream 51880 20640142 ~ 20644792 (+)
LOC122342277 LOC107741474 coding upstream 58061 20633884 ~ 20638611 (+)
LOC122343005 NA coding upstream 137658 20543132 ~ 20559014 (+)
LOC122342276 NA coding upstream 181043 20505411 ~ 20515629 (+)
LOC122342951 NA coding downstream 83329 20790175 ~ 20800541 (+)
LOC122343111 NA coding downstream 195373 20902219 ~ 20906726 (+)
LOC122343116 NA coding downstream 210704 20917550 ~ 20918689 (+)
LOC122342280 NA coding downstream 214589 20921435 ~ 20929163 (+)
LOC122342283 NA coding downstream 311306 21018152 ~ 21020872 (+)
G29947 LOC107709565,LOC107727338,LOC107575420,LOC107569100 non-coding upstream 51137 20645257 ~ 20645535 (+)
G29945 NA non-coding upstream 65343 20630820 ~ 20631329 (+)
G29927 LOC107681551 non-coding upstream 198804 20497097 ~ 20497868 (+)
LOC122343178 NA non-coding upstream 234330 20459370 ~ 20462342 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding upstream 253447 20440548 ~ 20443225 (+)
G30005 NA non-coding downstream 78463 20785309 ~ 20785530 (+)
G30003 NA non-coding downstream 173603 20880449 ~ 20882908 (+)
G30024 NA non-coding downstream 203308 20910154 ~ 20975778 (+)
G30025 LOC107561645 non-coding downstream 205712 20912558 ~ 20934912 (+)
LOC122343171 NA non-coding downstream 264664 20971510 ~ 20972249 (+)
G29921 NA other upstream 327856 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 349948 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 653219 20037933 ~ 20043453 (+)
G29835 NA other upstream 910544 19731262 ~ 19786128 (+)
LOC122343071 NA other upstream 946598 19745734 ~ 19750074 (+)
G30058 NA other downstream 411716 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 462347 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 661797 21368643 ~ 21761181 (+)
G30119 NA other downstream 681347 21388193 ~ 21630120 (+)
G30115 NA other downstream 932694 21639540 ~ 21641756 (+)

Expression


Co-expression Network