G30085


Basic Information

Item Value
gene id G30085
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21311555 ~ 21337024 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44580
tatttCTCCTTGTTTACCTGTCACCCCCATCCCCTGATAAAAGGGTCGAAAAAAGACCACGTGTTTGTGGTTTGCAGTGCAACAACACCTTTGTACGAGGCATGAGTGTTCACAAACATGGACTACTGCACTACTCACTATTTACCAACACTCTAAGCTGAACTGCATCAATGACTCAGCGCTCACTTACTCTGCTGTTTCCTCAAACTCTTTGTATAGGAACTTGACGTTATTTTAGCCTTGATCAAAGTACTATGTCTGCCATGTAGTGGTAGGAAATACAAATAAGGTATAACACCATATTAGGAACTGAAGTCTGTTTTATTAAGTATGACGTTGTCACAATTTTGCGACTTTGGCACTGAGTGGGttcaactgaaatatgcaataaacattaaatttaacaacattagataaGAAGAACTAATAAGAAACtgtgacaataataataataataataataataaaccatcaAATTCAgactaaatttgaaatgcaatgcagggaattctgggaatttCACAGgaattaaccatttaacagatttttactgtagcattttcacagtttttttctgttaaaatcaagGCCACAGTGTACTTTGAGTAGTTTAAAATTGTGTACttttacacaaatacattttttgttgtaattgtaCTTTTACCTGTTTGTGATTGTTAAATGCATGTATTCCGTTTATTTTTATCCATCAGCATGCAGCATCAACTGCTGTTAATCATgccacagtattttattttgagttttgtcATAGCTACGACCAGCTTTAAGTTTGTTCACATGTACAGACAGTTGCACCACATGATGTTTTGAAAGTGTGAGatacatattattttgtgttttatcagtttaaatgtacaaaaaatgttttcaattaaatgtatttcatcaAATACAATGACGTCAATAAagtatcaaattattttaaaattataacacggacaaattatttatgaatataaatccATGGCAAAACCTGATGGAGGTGGGGCAATGCAGCTGTAGATAATTTTTGCCACATGTcattcttttgattttttttttactcttaaataAGGTCTACTGTATGGTTGAAGAATCACTTAAAGTGATAAAAGGAaattttgatattatttcattatcataataataataataataataataataataatagtaataaaaaactgaattaaacaaaTCCCAGGTTTTCTAAGACATTTCAGAACCCTGATTGTTTTCTCATCAGTGAGAAAAAATCACACTGATGCAATCATACAACAGAGGAGGAGGAATATCTGCTCACTAtgaaatacattcatacacataCTTTAACGTATTAATTCAGTTCATGTAAAATTTCAAACCTCAGTATGTTCAGTCGACAGtgtggactcttcagtccatcagaaagcagcttcactcctgaatctcctgggtgattgtagctcagatccagctctctcaggtgtgaggggtttgaattcagagctgaagacacataacgacagccttcctctgtcaccatacagccagacaacCTACAAAAACA

Function

GO:

id name namespace
GO:0000041 transition metal ion transport biological_process
GO:0006826 iron ion transport biological_process
GO:0047372 acylglycerol lipase activity molecular_function

KEGG:

id description
ko04216 Ferroptosis
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU44580 True 1549 lncRNA 0.33 2 21311555 21337024

Neighbor

gene id symbol gene type direction distance location
LOC122342289 LOC107685875,LOC107749047,LOC107728228 coding upstream 5919 21292312 ~ 21305636 (+)
LOC122342966 LOC107563536 coding upstream 81451 21222570 ~ 21230104 (+)
LOC122342986 LOC107563545,LOC107667978,LOC107741456 coding upstream 125420 21182237 ~ 21186135 (+)
LOC122342287 LOC107722090,LOC107694763,LOC107585758,LOC107668179,LOC107574018,LOC107573797,LOC107697810,LOC107566573 coding upstream 128794 21177555 ~ 21182761 (+)
LOC122342285 LOC107725790,LOC107656690 coding upstream 143594 21167249 ~ 21167961 (+)
LOC122343117 NA coding downstream 40514 21377538 ~ 21379639 (+)
LOC122342293 NA coding downstream 61793 21398817 ~ 21400148 (+)
LOC122342295 LOC107573707,LOC107575631,LOC107689603,LOC107741456,LOC107667978 coding downstream 110216 21447240 ~ 21449510 (+)
LOC122343031 LOC107563545,LOC107564010 coding downstream 112493 21449517 ~ 21452862 (+)
LOC122343024 NA coding downstream 307295 21644319 ~ 21650178 (+)
G30090 LOC107749046 non-coding upstream 10548 21276110 ~ 21301007 (+)
G30077 NA non-coding upstream 63130 21248187 ~ 21248425 (+)
LOC122343163 NA non-coding upstream 144313 21163756 ~ 21167242 (+)
LOC122343205 NA non-coding upstream 177953 21131154 ~ 21133602 (+)
LOC122343166 NA non-coding upstream 185135 21126085 ~ 21126420 (+)
G30110 LOC107718524,LOC107563870 non-coding downstream 32398 21369422 ~ 21374537 (+)
G30132 NA non-coding downstream 142533 21479557 ~ 21522253 (+)
G30133 LOC107749047,LOC107571854,LOC107728228,LOC107669894 non-coding downstream 148688 21485712 ~ 21527011 (+)
G30134 NA non-coding downstream 159799 21496823 ~ 21498381 (+)
G30136 NA non-coding downstream 161840 21498864 ~ 21499514 (+)
LOC122342286 LOC107578117 other upstream 137215 21169193 ~ 21174340 (+)
G30058 NA other upstream 168724 21118562 ~ 21142831 (+)
G29961 NA other upstream 604709 20696672 ~ 20706846 (+)
G29921 NA other upstream 942739 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 964831 20344346 ~ 20346724 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 31619 21368643 ~ 21761181 (+)
G30119 NA other downstream 51169 21388193 ~ 21630120 (+)
G30115 NA other downstream 302516 21639540 ~ 21641756 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 894446 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 959873 22296897 ~ 22305148 (+)

Expression


Co-expression Network