G30104


Basic Information

Item Value
gene id G30104
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21333245 ~ 21721910 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44614
TccgcaacaataaatgcagcctccgggtgagcagactgttgtttactgatggctgcatgaagttcGTTCATAGCAAGCTTGGCATCAGCATTGGGAGGAATATAAGTAGCAGTTATGATGGTGGATGTGAACTCCCGTGGCAGATAAAACGGTCTAATCTTAACCATGAGAAACTCTAGGTTAGCTGAGCAGTGTCTCCCAATgataacagagtttgtgcaccaagcattgttaatataaatgcacaatccccCGCCTCCGGTCTTACCGGAGTCATCCGCCGTTCTGTCTGCCCGGAATGTGTGGTGTCCAGCTATGCTGATAGCATGGTCTGGTATACTGCTGTTTAGCCATGTTTCGGTGAAGATCATGACATTGCTgttctgaatttttttattgtatctgATGCGGAGTCGAATCTCGTCCATTTTGTTCGCCAGTGATCGTACATTGGCAAGGAAAATGCTGGGTAAAGAGAGCCGATGTGgtgttagctttagcttagcTCTTAGCCCTCCGCGCTTCCCCCGCCTTTGTTTACGATCGCGCCGCCGTCTTCGAGCACTTCCGCCCGGCCGGGAAGAGTGCTCAGCCTCGGTTGTTCTGATGATCTCTGGGACGAGTTGAAGGTTGCcgttaaaactgtctgaaaagGATGAACCAATATCCAAAAGCTCATGTCGGGTGTACGATGTAAAGGCACTGCTGTTCTGCACGAACAGACCCGAAATGAGCAGGTAAATTAGCAGGTAATTAACacgaactaaaggcagggcacacagagcacatgacatgagacaaaaacaataacaaaagagtccagagacgtgacagcAACTAATTAAGAGACTCCAAAATGGTTATCCAAatgaaaaattgtataaatatgcaGGTGATATGTTACTGGTACACACTTATGGAAGGATTATGTAATTATGACTTTGAAGATCTTCCCATGTCACGGTCAATTCAATCAATACCAACTGTTTCAAAGCCTCAGACAGAATAATGAATGCCAGGTGATAAAGATGTTACTGCTATATGGGCTGGGTATTTCAGCTGCTTCTCTAGGTCGCCAGCTGCAGACATGTGCTGTATGAAGAAGGCCTGCTGGAACTTTGCACTGCTGCATTGGTTGCTCTCGATGATGGTGCTTGCTACTTGCAATGGCCAGGGATATACTCTATGCTACTACCTTAAAGGGGTATTTACCTTGCCTCAGAGCTGGAGGTTCACTGGGCTTGGCAAGGCATCATAAACAGCTTGAATCAAGCATTTCATGTGCTGCGGATCTGCTTGCCAGATGTTAGTCCACAAGAgccacacagagcacatgacatgagacaaaaacaataacaaaagagtccagagacgtgacattaccccaccttcccggaaggtgcgtcctcgcacctaaagagtaacattaaaaaaaccaaaaaaacaactaggaattggggataccggatcttgagaggaggttctggtggaggacggcccccaggagaGAGTAGGCAGACAgtccagggaggagacaggaagagtccggagcaggaggagatccagagcccagccatgatagTCCACGGttgagccgacggagggaggagccatggaggcggcggagcaggtggcggAGGAGACAGAAGCGGAGACGGAgcgccgaagagccagggtgacgccgaggcgctggaggtcctaggtgACGCcagcaggcttcggcgactgacacggagatgggggacgggaaggacgcggcggagccagagcgacagaggactgaggtggagccggagggaaggaagagcctgacagagccggtgggatggagggacgaggcgaagacGGAGGACAGGAATCAcaaggcgacggatggtcgacgacagaccaaggcggagccggagggacgatggagcctggtggagctggtggactgacagaccacggtggagaggaaggagctaggagcccagggggaggcGAGGGATCTTCCACCcacgacggcgatggagaccggcagacccgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44614 True 2028 lncRNA 0.51 2 21333245 21721910

Neighbor

gene id symbol gene type direction distance location
LOC122342289 LOC107685875,LOC107749047,LOC107728228 coding upstream 27609 21292312 ~ 21305636 (+)
LOC122342966 LOC107563536 coding upstream 103141 21222570 ~ 21230104 (+)
LOC122342986 LOC107563545,LOC107667978,LOC107741456 coding upstream 147110 21182237 ~ 21186135 (+)
LOC122342287 LOC107722090,LOC107694763,LOC107585758,LOC107668179,LOC107574018,LOC107573797,LOC107697810,LOC107566573 coding upstream 150484 21177555 ~ 21182761 (+)
LOC122342285 LOC107725790,LOC107656690 coding upstream 165284 21167249 ~ 21167961 (+)
LOC122343144 NA coding downstream 19413 21741323 ~ 21742305 (+)
LOC122343035 NA coding downstream 87246 21809156 ~ 21814437 (+)
LOC122342305 LOC107697548,LOC107574116,LOC107758214 coding downstream 119271 21841181 ~ 21842230 (+)
LOC122343067 NA coding downstream 381408 22103318 ~ 22104932 (+)
LOC122343041 zbtb24,LOC107736039 coding downstream 383326 22105236 ~ 22107457 (+)
G30090 LOC107749046 non-coding upstream 32238 21276110 ~ 21301007 (+)
G30077 NA non-coding upstream 84820 21248187 ~ 21248425 (+)
LOC122343163 NA non-coding upstream 166003 21163756 ~ 21167242 (+)
LOC122343205 NA non-coding upstream 199643 21131154 ~ 21133602 (+)
LOC122343166 NA non-coding upstream 206825 21126085 ~ 21126420 (+)
G30130 NA non-coding downstream 27100 21749010 ~ 21811284 (+)
G30205 NA non-coding downstream 419434 22141344 ~ 22255433 (+)
G30206 NA non-coding downstream 440728 22162638 ~ 22240294 (+)
G30212 NA non-coding downstream 453045 22174955 ~ 22252519 (+)
G30226 NA non-coding downstream 528525 22250435 ~ 22251792 (+)
LOC122342286 LOC107578117 other upstream 158905 21169193 ~ 21174340 (+)
G30058 NA other upstream 190414 21118562 ~ 21142831 (+)
G29961 NA other upstream 626399 20696672 ~ 20706846 (+)
G29921 NA other upstream 964429 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 986521 20344346 ~ 20346724 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 509560 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 574987 22296897 ~ 22305148 (+)
LOC122343019 LOC107705900 other downstream 939916 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 1056073 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 1407196 23129106 ~ 23130189 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016237 NA non-coding NC_007113.7 CM002886.2 14438985 ~ 14440380 (-)
grasscarp (Ctenopharyngodon idella) G521880 NA non-coding CI01000371 null 104688 ~ 105076 (-)