G30130


Basic Information

Item Value
gene id G30130
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21749010 ~ 21811284 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44657
gtgaagacagaatgtCTCTCCTAGGACCACAACCTTaatgtggtggaggggtttgagtgcctcaGTGGCCCTAGGAGCTATGTTGGCCGGGGCTATATggccctggtagggtctcccaaagcaaacaggtcctagTTGACAAGCTAGACAAAGAGTGGTTCTGTTGGATCTGTTGGCGGAGGAAGAAGCCGGACAGACTcagcaggcccaaacgtactgTGAAGGTCTGTTGGGCAACCCCTGAATCCGGTGGTGGACACCGGATGTAAGGAATGGTGTCAAGGAGTCCTATCAGGCCTTGTTGGgtcctccagtttttcagagaggtGATCAGTTGACATCTCCACCCCTCTCT

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44657 True 355 lncRNA 0.54 2 21749010 21811284

Neighbor

gene id symbol gene type direction distance location
LOC122343144 NA coding upstream 6705 21741323 ~ 21742305 (+)
LOC122342967 LOC107569100,LOC107575457,LOC107679413,LOC107566978 coding upstream 58478 21673720 ~ 21690532 (+)
LOC122343024 NA coding upstream 98832 21644319 ~ 21650178 (+)
LOC122343031 LOC107563545,LOC107564010 coding upstream 296148 21449517 ~ 21452862 (+)
LOC122342295 LOC107573707,LOC107575631,LOC107689603,LOC107741456,LOC107667978 coding upstream 299500 21447240 ~ 21449510 (+)
LOC122342305 LOC107697548,LOC107574116,LOC107758214 coding downstream 29897 21841181 ~ 21842230 (+)
LOC122343067 NA coding downstream 292034 22103318 ~ 22104932 (+)
LOC122343041 zbtb24,LOC107736039 coding downstream 293952 22105236 ~ 22107457 (+)
LOC122342312 NA coding downstream 592769 22404053 ~ 22405822 (+)
LOC122343018 LOC107705900 coding downstream 622770 22434054 ~ 22446278 (+)
G30104 NA non-coding upstream 27100 21333245 ~ 21721910 (+)
G30133 LOC107749047,LOC107571854,LOC107728228,LOC107669894 non-coding upstream 221999 21485712 ~ 21527011 (+)
G30132 NA non-coding upstream 226757 21479557 ~ 21522253 (+)
G30136 NA non-coding upstream 249496 21498864 ~ 21499514 (+)
G30134 NA non-coding upstream 250629 21496823 ~ 21498381 (+)
G30205 NA non-coding downstream 330060 22141344 ~ 22255433 (+)
G30206 NA non-coding downstream 351354 22162638 ~ 22240294 (+)
G30212 NA non-coding downstream 363671 22174955 ~ 22252519 (+)
G30226 NA non-coding downstream 439151 22250435 ~ 22251792 (+)
G30233 NA non-coding downstream 462527 22273811 ~ 22280970 (+)
G30115 NA other upstream 107254 21639540 ~ 21641756 (+)
G30119 NA other upstream 118890 21388193 ~ 21630120 (+)
LOC122342286 LOC107578117 other upstream 574670 21169193 ~ 21174340 (+)
G30058 NA other upstream 606179 21118562 ~ 21142831 (+)
G29961 NA other upstream 1042164 20696672 ~ 20706846 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 420186 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 485613 22296897 ~ 22305148 (+)
LOC122343019 LOC107705900 other downstream 850542 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 966699 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 1317822 23129106 ~ 23130189 (+)

Expression


Co-expression Network