G30133 (LOC107749047,LOC107571854,LOC107728228,LOC107669894)


Basic Information

Item Value
gene id G30133
gene name LOC107749047,LOC107571854,LOC107728228,LOC107669894
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21485712 ~ 21527011 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44664
CCAAACTGATCTGTATTCTTTAACCACAGGTAACAGATACTGAAGAACTTCATCTACTGTATGTTGTTGTCCAATAAACTCTTTTAGATCAAAAATATCCATCTTCTGCTCTGATGTCAGCAACACATAAACCAGAGCTGACCACTGTGAAGAGGAGAGTTTGGTTTCTCTTATTTCTCCATATTTCAGATAACCCTGGATCTCCtgcatcagtgaatcatcacccagttcattcagacagtgaaacagattgatggatttcTCTGAAGAGTGATTCTCCCTGATCTTCTTTTTGATGAACTGAACTGTTTCCTCTTTGTTGTAGGAgcagcttcctgtctgtgtcAGTAGTTTTCTTAAGAGAGTCTGATTGGACTCCACTGAGAGACCCAGAAGAAACCGCAGGAAAAGATCCAGATGTCCATTCTTACTCTGTAGAGCCTCATTCACAGCTCTCTGATGCAGCTTAGATAACGGTCTAAATATGTGTAagacattaaagaaataattttgtttgATTTGGTCAAACACATTTATCTTCTTTATTGTTAAGGAGAGGTGTGCATGTAGAGCTGCTAGATGTTCCTGAAGACTCAGATGAATGAAGCAGAAGACTTTCCCCTGAAACAAGCCCAgctcctctctgaagatctgagtgcacaGTCCTGAGTAAACTGATGCTTCTGTCTCATCAATGTCACACTCTCTCAGGTCTTCATCATAGAAGATCAGGTTTCCTTTCACAAGCTGCTGAAAAGCCAGTTTCCCCAGTTTGAGGATCATGTCTTCATCTGTCAGGTTCTTCTCATAGTCCttctcatgtttgatgttggtctgaaggatcaggaagtgtgtgtacatttgagtgagagTCTTGGGAATCTCTCCAGTCTCTGCTCGACTCAAGATCTTCTCAAGAACagtggctgagatccagcagaagattgggatgtgacacatgatgaaGAGACTCCTGGAGGACTTCAGGTGTGAGATGATCCTGTCGGCCAGACTCTGATCACTGATCCTCTTCCTGAAGTATTCCTCCTTCTGTGGCTCATTGAAGCCTCGTACCTCTGTCACTCGATGGACGCAGTCAGAGGGGACgagatcagctgctgctggtctggaggtgatccagattaaagcagagggaagcagattccccacaatcaggttcatcagcagcacatcCACGGAGGCTGACTCAGATATATTACACAGATTCACTTTACTCTTAAAGTCCAGAGACAGACGACACtcgtccagaccatcaaagatgaacaacactttatattcatcactgaatatttccatttctttagttTCAGGGAAGAAGACGTGAAGAAGATCTGAACGACTGAGTGTTTTGTCCTTCATCATgttgatttctctgaaaggaagtggaaatatgAGCTGGACGTCCTGATTCTCTTTCCCTTCGGCCCAGTCCAGGacgaacttctgcacagagactgtttttccaatgccagcgactccTTTGTCAGCACAGTTCTGATGTCTTTGTCTTTGTACAGGTAAAGTTCTGTGTCTCAATCTGTCTCACCTCATGCTCagagactgtttttccaatgccagcgactccCTTTGTCAGCACAGTTCTGATGTCTTTGTCTTGTCCAGGTAAAGGTCTGAAGATGTCACTGCATTTGATGGCTGTGTCCTCTGTTGCTTCTCCCCTGGATTGTGTCTCAATCTGTCTCACCTCATGCTCATTAttgatctctcctctctcactctctgtgatgtagagctctgtgtagatctcATTCAGCAGTGTTGTGTTTCTCTGCGTCGCTGTTCCCTCACACAGACACTTAAACTTCTTCAGCAGATTTGATCTAAATGTGTTGAGG

Function

NR:

description
PREDICTED: protein NLRC3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44664 True 1877 lncRNA 0.44 2 21485712 21527011

Neighbor

gene id symbol gene type direction distance location
LOC122343031 LOC107563545,LOC107564010 coding upstream 32850 21449517 ~ 21452862 (+)
LOC122342295 LOC107573707,LOC107575631,LOC107689603,LOC107741456,LOC107667978 coding upstream 36202 21447240 ~ 21449510 (+)
LOC122342293 NA coding upstream 85564 21398817 ~ 21400148 (+)
LOC122343117 NA coding upstream 106073 21377538 ~ 21379639 (+)
LOC122342289 LOC107685875,LOC107749047,LOC107728228 coding upstream 180076 21292312 ~ 21305636 (+)
LOC122343024 NA coding downstream 117308 21644319 ~ 21650178 (+)
LOC122342967 LOC107569100,LOC107575457,LOC107679413,LOC107566978 coding downstream 146709 21673720 ~ 21690532 (+)
LOC122343020 LOC107667978,LOC107741456,LOC107575631,LOC107563545 coding downstream 146791 21673802 ~ 21809079 (+)
LOC122343144 NA coding downstream 214312 21741323 ~ 21742305 (+)
LOC122343035 NA coding downstream 282145 21809156 ~ 21814437 (+)
G30110 LOC107718524,LOC107563870 non-coding upstream 111175 21369422 ~ 21374537 (+)
G30085 NA non-coding upstream 148688 21311555 ~ 21337024 (+)
G30090 LOC107749046 non-coding upstream 184705 21276110 ~ 21301007 (+)
G30077 NA non-coding upstream 237287 21248187 ~ 21248425 (+)
LOC122343163 NA non-coding upstream 318470 21163756 ~ 21167242 (+)
G30130 NA non-coding downstream 221999 21749010 ~ 21811284 (+)
G30205 NA non-coding downstream 614333 22141344 ~ 22255433 (+)
G30206 NA non-coding downstream 635627 22162638 ~ 22240294 (+)
G30212 NA non-coding downstream 647944 22174955 ~ 22252519 (+)
G30226 NA non-coding downstream 723424 22250435 ~ 22251792 (+)
LOC122342286 LOC107578117 other upstream 311372 21169193 ~ 21174340 (+)
G30058 NA other upstream 342881 21118562 ~ 21142831 (+)
G29961 NA other upstream 778866 20696672 ~ 20706846 (+)
G29921 NA other upstream 1116896 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 1138988 20344346 ~ 20346724 (+)
G30115 NA other downstream 112529 21639540 ~ 21641756 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 704459 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 769886 22296897 ~ 22305148 (+)
LOC122343019 LOC107705900 other downstream 1134815 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 1250972 22777983 ~ 22780139 (+)

Expression


Co-expression Network