G30240


Basic Information

Item Value
gene id G30240
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20327906 ~ 20446324 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44793
ATGCTTTGGTGGACATGTGGCCTATATGAGGATTTCTGACACATTTATTCTGTCTCAGTGACAGAAGATGAGTATTAGACAGAAgtattaattagtattattatcatGAAGTCTCATAACATCTCACTGTGACTGTCTCAAAGCATTATGAGTAAAATCTCTTTGTGGTCtattctgattcatcaacacagaTCCAGTGATCCGAAATAAGACACAGTAAACCCAGGATAGAgggtctgagtgaatgtggtctggactgtgtggataTGTGTGATTGTGTCAGAGatgctgtagaaggacagagttcctgcgctcttatccacatacactcctgtTCTATGGAACTTCAACACTTCTGTTTTTCTGATGAtgatgggcttcacagagaGATGAGTCTCTTTGttattgtgtctgaatgagtaATATACAGAATTGCAgaacaaactccaggactgatcggTACCTCCAAACCAACACTCATAACTTCGTCCCTTCTTTCTGATGCTTTTATATGACACTGCTATATACACTTCTCCACTCCACTCaatctcccagtaacagcgtccataCACTCTTTCTCGACAAAACACCTGAGGATTATCAAATCTGTCTGCATGATCCGGATATAGCTGATTACAATGAGGCACCCACATCACCTTTCTGTTGTCCTCAGACAGAAGGAGATGATTGCTTGCTGTGTTTGCATCCAGTGTGAGAAAACAGG

Function

GO:

id name namespace
GO:0003779 actin binding molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
TU44793 True 724 lncRNA 0.41 2 20327906 20446324

Neighbor

gene id symbol gene type direction distance location
LOC122343007 LOC107723241,LOC107659605,LOC107550566 coding downstream 58000 20266961 ~ 20269906 (-)
LOC122343064 LOC107723244,LOC107659594 coding downstream 61057 20263660 ~ 20266849 (-)
LOC122342268 NA coding downstream 76021 20241615 ~ 20251885 (-)
LOC122343114 NA coding downstream 161492 20164709 ~ 20166414 (-)
LOC122343134 NA coding downstream 167633 20157155 ~ 20160273 (-)
LOC122342952 LOC107575457,LOC107561645 coding upstream 122055 20568379 ~ 21492901 (-)
LOC122342969 LOC107575457,LOC107561645 coding upstream 144791 20591115 ~ 20615223 (-)
LOC122342955 LOC107575457 coding upstream 233766 20680090 ~ 20690873 (-)
LOC122342956 LOC107566978 coding upstream 246638 20692962 ~ 20716250 (-)
LOC122343016 NA coding upstream 271658 20717982 ~ 20733084 (-)
LOC122343168 NA non-coding downstream 16716 20303113 ~ 20311190 (-)
G29905 NA non-coding downstream 55617 20271106 ~ 20272289 (-)
trnal-aag_28 NA non-coding downstream 111667 20216160 ~ 20216239 (-)
trnal-aag_27 NA non-coding downstream 113574 20214249 ~ 20214332 (-)
trnal-cag_25 NA non-coding downstream 114584 20213241 ~ 20213322 (-)
G30254 NA non-coding upstream 22182 20468506 ~ 20468796 (-)
G30258 NA non-coding upstream 68493 20514817 ~ 20515117 (-)
G30262 NA non-coding upstream 146995 20593319 ~ 20598701 (-)
G30270 NA non-coding upstream 185911 20632235 ~ 20632507 (-)
G30272 LOC107561645,LOC107750396,LOC107727338,LOC107734660,LOC107575457,LOC107569100 non-coding upstream 198640 20644964 ~ 20645535 (-)
G29906 NA other downstream 45506 20281106 ~ 20282400 (-)
G29902 NA other downstream 89352 20237137 ~ 20238554 (-)
LOC122343146 NA other downstream 318194 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 990414 19333729 ~ 19337492 (-)
G29787 NA other downstream 1396031 18931536 ~ 18931875 (-)
LOC122343123 NA other upstream 412099 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 602533 21048857 ~ 21053725 (-)
LOC122343113 LOC107749046 other upstream 829898 21276222 ~ 21279043 (-)
LOC122343135 NA other upstream 881291 21327615 ~ 21336881 (-)
G30395 NA other upstream 937145 21383469 ~ 21386437 (-)

Expression


Co-expression Network