G30258


Basic Information

Item Value
gene id G30258
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20514817 ~ 20515117 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44823
CCACTGAGAGACCCAGAAGAAACCGCAGGAAAAGATCCAGGTGTCCATTCTTACTCTGTAGAGCCTCGTTCACAGCTCTCTGATGCAGCTCAGATAAAGGTCCAATTTCATTAAAgaagacagaaaagaaagatttttgttGGATTTGGTCAAACACATTTATCTTCTTTATTGTTAAGGAGAGGTGCGCATATAGAGCTGCTAGATGTTCCTGAAGACTCAGATGAACAAAGCTGAAGACTTTCCCCTGAAAGAAGCCCAgctcctctctgaagatctgagtgcacaGTCCTGAATAAAC

Function

GO:

id name namespace
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function
GO:0015114 phosphate ion transmembrane transporter activity molecular_function

KEGG:

id description
ko00052 Galactose metabolism
ko03320 PPAR signaling pathway
ko04973 Carbohydrate digestion and absorption
ko04975 Fat digestion and absorption
ko04979 Cholesterol metabolism
ko04977 Vitamin digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU44823 True 301 lncRNA 0.43 1 20514817 20515117

Neighbor

gene id symbol gene type direction distance location
LOC122343112 NA coding downstream 181536 20330447 ~ 20333281 (-)
LOC122343007 LOC107723241,LOC107659605,LOC107550566 coding downstream 244911 20266961 ~ 20269906 (-)
LOC122343064 LOC107723244,LOC107659594 coding downstream 247968 20263660 ~ 20266849 (-)
LOC122342268 NA coding downstream 262932 20241615 ~ 20251885 (-)
LOC122343114 NA coding downstream 348403 20164709 ~ 20166414 (-)
LOC122342952 LOC107575457,LOC107561645 coding upstream 53262 20568379 ~ 21492901 (-)
LOC122342969 LOC107575457,LOC107561645 coding upstream 75998 20591115 ~ 20615223 (-)
LOC122342955 LOC107575457 coding upstream 164973 20680090 ~ 20690873 (-)
LOC122342956 LOC107566978 coding upstream 177845 20692962 ~ 20716250 (-)
LOC122343016 NA coding upstream 202865 20717982 ~ 20733084 (-)
G30254 NA non-coding downstream 46021 20468506 ~ 20468796 (-)
G30240 NA non-coding downstream 68493 20327906 ~ 20446324 (-)
G30238 LOC107561645,LOC107575457,LOC107747810,LOC107566978,LOC107667978,LOC107575420 non-coding downstream 73976 20321574 ~ 20440841 (-)
LOC122343165 NA non-coding downstream 84132 20428611 ~ 20430685 (-)
LOC122343168 NA non-coding downstream 203627 20303113 ~ 20311190 (-)
G30262 NA non-coding upstream 78202 20593319 ~ 20598701 (-)
G30270 NA non-coding upstream 117118 20632235 ~ 20632507 (-)
G30272 LOC107561645,LOC107750396,LOC107727338,LOC107734660,LOC107575457,LOC107569100 non-coding upstream 129847 20644964 ~ 20645535 (-)
G30273 NA non-coding upstream 134989 20650106 ~ 20650832 (-)
G30286 NA non-coding upstream 161143 20676260 ~ 20677864 (-)
G29906 NA other downstream 232417 20281106 ~ 20282400 (-)
G29902 NA other downstream 276263 20237137 ~ 20238554 (-)
LOC122343146 NA other downstream 505105 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 1177325 19333729 ~ 19337492 (-)
G29787 NA other downstream 1582942 18931536 ~ 18931875 (-)
LOC122343123 NA other upstream 343306 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 533740 21048857 ~ 21053725 (-)
LOC122343113 LOC107749046 other upstream 761105 21276222 ~ 21279043 (-)
LOC122343135 NA other upstream 812498 21327615 ~ 21336881 (-)
G30395 NA other upstream 868352 21383469 ~ 21386437 (-)

Expression


Co-expression Network