G30262


Basic Information

Item Value
gene id G30262
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20593319 ~ 20598701 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44827
cccaaggcgaaataaaacacaagacaagtttttggatttttagcttgcaaggattgcgctgttggttgcaagcgggagaaaagcaggtttctcctttacCTCCCTTTGCCTccttttgcctccgaagctcagatcgcaagtcactttatttatagaggaaaggacagagcaagataagtaaaaacaactggcaaaacaaagacttcagacatgtttgTCACATAAGTTATCACTAGTCACatctttttgtgcgtcagaatcttcattccttcagattcCCCTGGCGCCCATATCAGTCTAAGATTCTATATAGAGGTCATGTCATGTTATGACCTAGAACAAGAAGTGTTATgacagatggaagctgaaacctgaaaggtcaaagttgcaaaatgtcaatacacagCTTCAACGTCAATACACAACTCCaacatctccctcctgtttgacatttagcacctaagaaataacataataatgcaaatgcatattgaactacatctctactgattacttgattaaataatcgatgctttaaacagcaaggatgggcgaaaaccccagtatctgaggaaaaattcccaaccgacccccaagatgttacatgggcaatcacctgtaaggcttgtatcttatgtatacaatataaaatttaaagatAGAAAAtgggaggaaaatgtgaaaataaacaaaaaggaaaaatgaaataaaacagtgcctcttgttcttggcacggctactgtagcttgtcagtgtaccttttgtatcacaacatcagcactcagccatgtcacagctgtggttttaactgagacttcacacatgatactaaagctctccatttctctcttggtggagaagcatggtaaaactgaaaaatgtctggctgatcattttagtaatcattgcccttaaacatggtaaaacacagatcatgcataaacacatgttcaaatcaaaaataagtttttagtTCTTGTAGTTCTGTGAACCAGTCGAAATTCAACTCGTTTCCGTTCCCCTTTAATCGTCTCTCATATGGCCACCAATGTGACCGTGGCTGCTGCAGTCAGGTTTAGAGCAACTCTCCAGCCCTCACGTGCTCCCATTGGGGGCGCTATAGCTGGGAGTAAGggattagttgatttcttcagcagccaagggttttgataccggccgacttccacccctactcagcgtcctcccaaggtgttagcagtttgcaatggctttgGTGGATCCACGTAGATCTCTCAGTGAGTGTGGTCAGGATAACGGTGAATGATCCTTCCCACCTTGGCGACGACCAGTTCTTTCTCTTGATAACTTTGatcaggatgctgtcgcctGGTTTCACGCTTGAGGcctgtggggacagaggtatatctggcagatcatttgctctcacaacatctttaaatttcaacattttgttcatccattctgctaatgtatgctgctcttgtcgtttctcacacacatcatcacacagcggtaaactgaaCGGTCTGCCATACAGTATTTCAAAAGGTGTTAGCCCTTTGTCAGTGGGCGTTATTCTCGTATACATTTTGACCACAGTCAAACATTTAACCCAatttctgcctgtctgttcCATTGTTTTCCTCAACCTGATTTTAACTGTGCCATTAGTTCTCTCAACCAATCCTGCACTCTGTGGGTGATAAGAACAATGGTTTTTAAGCTCTATGCCTAAATTAATGGACATCTGAGTGACTACATCATTCACAAAATGTGGTCTATTATCACTGTACAGTCTCTGAGGTACTCCATGTTCTGGTATGATTACCTTACACAAAGCTTTAGCCACCGTTAGTGCATCAGCATGTTTACTTGGCACTATTTCAACCCATTTGTAGAATGGATCTACCAGCACcaaacagtatttgtactgttggcaaggtgtcagttcaataaaatccatgtggatgAACTGAAAagggtagtctggctttggaaattgacctctcttaggtctgcagttGCCCTGcgagttatgtttacagcagatcaaacaagatttacaaacattttttgagtAGTTATTAAAGCCTGGTGCATAAAAGAATTGTTCTACCttatgcaccatccctcctgttgacacatgtgcttgcccatgtgtcaaaattgctgctgttttgtacaaacttcgtggaaggcacagtttgccttcaagtctgtatgTGTCATCTGACAATTGTGCTCCTTTTAACCACATCTGCTTCTCGGATGCTAGTGCTTGTTTTTGCATGTCTGATATCACTGACACATCTAATGGAGTTTCTAATGATgttactttgtgtatttcacATATCTCTAACTTCCCTTGTGCAGCTGGGCTTCAACTATTATACCTGCCTTAATCATTTCGTCAATAACTGGTTTTATGCCTTCCTGTGCATCTGGCTTAAGGGGATACTGCTTTATGCGGGGCCtatagtttgtttttggttttataacCACTGGTGATGCTGTTGTCATTAACCCTACGTCTGTCTTCCCTCTTGACCAAAATGTTTCTGGCACTGCATTGAGAAAAGGATCTATTTCAACAGCGGCTAAGGAAAGTCATACTGTTTCTTCAGTCAAATGGGCTCTGGGGGTAAGTGTACACACCCAGTTCACTGTTTTGGAATAGAGAGAGCGCCTCTCATTCACTTTCCACCCATCCCCATTGTCTGACCACCTGTCTAGCTCTCCTTTCTCTATCAGTTTTGGCAACACTTCCCACTTCATCTTATCTGTTTTAGACAATGATACATGTGGAGGTCTGTCTTGACCTTCAAAAAGTCACTGTGCCTCGCTGTAAAGTTTCACAGAGCatacagcatttccttttctaTCTGTGTATACTGTGCTCAATGTCACATGCTGAGGGCCTAGCCTCGAAAATCTTTCTGAGTAGGCTGGGTCAGGCCCTGGGTCTCGCTTGTAATACATAGTCACATGCaggtcactttcagttttaacttcTGTCTTTGAGGGTGTTGGTTCTGGTAGCAAATCTAGTAGATTAGACCAGTAGTAGTTGGGTTCTTTTAAACACTGTACTGGGTATGTGGGCACTTCCCCATCCTTCCCTATGGCAACCATGCCTGTTTTCAGTGGGTGTATGGAAATTTGTGGGGACATAAGATCCCTACCCAGGAGGTTTACGGGACAACCTGGACATAACACTACTTCTGTGTCTGTGCTGAGACCTGTTTTTGGATCTTTAATGGTGGTTAGTTGAGAAAACTTATTCTCTGTAACCAGCCCATTGGCTGATATCACATATATTTTCTTAGAGCTAGGCTGCAATCCTGGAATTATGTCATGTAATACTGTTCTGTCTGCCCCAGAGTCACAGAAAAATTTTACTCGGGTTCTATTCACTATTAGTTCGGGTAAGCGAGTACTTCTTGACAAAGCTAAAAAGGCCTCGATACTGCTCTGCAAGTCTAGGTCAattttggggtcattatcagCCTCGCCTAGATCTGGGTCATCTTCTGGGTCATCTATGGGGTCATTATTGGTCTCGCCTAGTCGTAACTGATCATTATATGGGGCTGGTCTGTGTCTTTCATCAGGGCTTCTACCCTGTGTTCTGGGCTTTAGCAGTTCTGGGCATTCTCGGATATAATGGCCTTCcttgtggcaattaaaacacctaTCATATTCTTTGTCATCGCGTGTCTGTTTCGACAACCTTCTCTCTCTATCTCGACCACATGCTGCTTTCCTCCCCCTCCCTCTCCGATTAGCTTGGTAGAATGTGTCTGCACCAAGCGAGGTCATGCCTTGGGAGAGGGTGCctgtctgctttttcttttttatttataggacTCCCTGTCCATGACTGGGTCAGTGGACCagtttatgttatattttttgtagtcTGCCAACTGGGGTCTGAATTCTAAAAGGAGTGcctgttttaattgctgttggtaTGCACCAGCCTCATCAGCACTATACTGAACCCCACTGTTAACCCTAAAAACGTCTTCCAGACGTGCTCTGTATTTAtgtacatcttctccatctttctgtttacACTGGGCTATATTAGAGTAATCTGGGCGTGTTCCAAAGGGTGTCTCTAATTCTTTCTGTCAGTTGTTCTACTGACTCTCGCAATGTCGCTGCATCATGAGCTAACGGATCATCATTCTCGTCTAGACCCGTGAAATTACCCCTAACTTggccatatttgtatttaagagcTAATCTCGCAACTCTATCAACCTCTAGGCCATTTAAACGATACGTACGTATCAGTTGGTTAAAATGCTCTAACCATGCAGCGGTATTTTCAAGTGGACCAAGTGCATCTGCTGCCTCTTTAATTTCTTGGTCTGACCATGGGCGATACACGTGAAGGTATCTATTGCGATCGTCCTCTACACCGTAATGTGGATTAGCCACTTGGAtggctggaaaaataaaatctgaatctgatgaaAGGTGTGATGAGTTCAAGGGATCTTTTTTATACCCTTCTTCCACCTTACTATTCACTAACAGAGAGATTGCTTCAGTATGCGGTGCATTTCTTCTAGTGCAAGGGGGACTGAATTCAGTTATCTTGGATgggtcatgtttttttcttttttttttctttccctatGCTCACACTTTGTTTTGTGCTGTCTGCTCACTCAGCTCCTCTCGTTGAGCTGCTGCAGCCATCTCCTGGCCTCTAGCTGCTCTTTCTACTCTTAACCTTTTTGCCGATACAATGCCTCTGGTCTCCCAACATAATCTGCTGAATCTTCTTTTTTCTGCACTGCAATCaatctttcttgtttctgtctttttttctcttcgacTTTCGCCTGTCTTTTATCTGCCTGCTCTTGCCACTTTGTCGCTTCAAtcaattgaagtttcaacagatcaccctttttcccttggctaaggataagtcaacctttattttgtttattaagagagcgcagtcccttttgactaatttaccactgaaatcatattttttattccactcatagAGGTATagcacactgtctgccgaatatgtatgcataaactttggatctcccgtcaatttactattttctgcacccatatttgcttttggtaagagtcaacgattagtcacacgtctgatcagatcgtccactgcaccaagcttctacagacactaatttgtctgcggatacagccgtctgaacagaccaacttttcaattttgactcaaacccgATATAATTTTCTATGTTTGAATAACACAACCGGGAATTAGTTGACCTCAACCAGCCACCAGataaatgacagtaaaagcaagcgtcacttaccctttCTGGTGGCTGGGAGCCAGTCTCTGTCGATCCTCCATCCCGGCGTGGGTTAACTCAGG

Function

GO:

id name namespace
GO:0072006 nephron development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44827 True 5383 lncRNA 0.42 1 20593319 20598701

Neighbor

gene id symbol gene type direction distance location
LOC122343112 NA coding downstream 260038 20330447 ~ 20333281 (-)
LOC122343007 LOC107723241,LOC107659605,LOC107550566 coding downstream 323413 20266961 ~ 20269906 (-)
LOC122343064 LOC107723244,LOC107659594 coding downstream 326470 20263660 ~ 20266849 (-)
LOC122342268 NA coding downstream 341434 20241615 ~ 20251885 (-)
LOC122343114 NA coding downstream 426905 20164709 ~ 20166414 (-)
LOC122342955 LOC107575457 coding upstream 81389 20680090 ~ 20690873 (-)
LOC122342956 LOC107566978 coding upstream 94261 20692962 ~ 20716250 (-)
LOC122343016 NA coding upstream 119281 20717982 ~ 20733084 (-)
LOC122343149 NA coding upstream 134573 20733274 ~ 20758659 (-)
LOC122342954 NA coding upstream 166093 20764794 ~ 20782505 (-)
G30258 NA non-coding downstream 78202 20514817 ~ 20515117 (-)
G30254 NA non-coding downstream 124523 20468506 ~ 20468796 (-)
G30240 NA non-coding downstream 146995 20327906 ~ 20446324 (-)
G30238 LOC107561645,LOC107575457,LOC107747810,LOC107566978,LOC107667978,LOC107575420 non-coding downstream 152478 20321574 ~ 20440841 (-)
LOC122343165 NA non-coding downstream 162634 20428611 ~ 20430685 (-)
G30270 NA non-coding upstream 33534 20632235 ~ 20632507 (-)
G30272 LOC107561645,LOC107750396,LOC107727338,LOC107734660,LOC107575457,LOC107569100 non-coding upstream 46263 20644964 ~ 20645535 (-)
G30273 NA non-coding upstream 51405 20650106 ~ 20650832 (-)
G30286 NA non-coding upstream 77559 20676260 ~ 20677864 (-)
G30293 NA non-coding upstream 137445 20736146 ~ 20737160 (-)
G29906 NA other downstream 310919 20281106 ~ 20282400 (-)
G29902 NA other downstream 354765 20237137 ~ 20238554 (-)
LOC122343146 NA other downstream 583607 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 1255827 19333729 ~ 19337492 (-)
G29787 NA other downstream 1661444 18931536 ~ 18931875 (-)
LOC122343123 NA other upstream 259722 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 450156 21048857 ~ 21053725 (-)
LOC122343113 LOC107749046 other upstream 677521 21276222 ~ 21279043 (-)
LOC122343135 NA other upstream 728914 21327615 ~ 21336881 (-)
G30395 NA other upstream 784768 21383469 ~ 21386437 (-)

Expression


Co-expression Network