LOC122343098


Basic Information

Item Value
gene id LOC122343098
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21048857 ~ 21053725 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU44912
GACGTCATAAGGCTGCGCCGCGCTCCTACATCTGTGATTTAACCGAAGAAATGTGCTggcttttaatcattttaagtgtttaaaactcGTTAGAGAATTACACGGAAGATACATTGTTAGCCGATGTAACACTGTGATGCGTTATTTAGTGACATTGCGGTCCCTGTTTAGTAAATAATTTAGCTTAAACGAATTCTTCCACTGTCCaaaatcacagaaaaacacCCGGAGAAACAGCCGAGATCCACGTGGCACTAATATAAAGATGGCATttgttaaagaggagagtgaagacgTGAAGATTGAAGAAACATTCAGAGTCAAA
>XM_043237423.1
GGTATAACATTTTCTAATGTAAAATGATCTCGATGAAATCGaacaagacttttattttggtctgGTGATGTGACGTCATAAGGCTGCGCCGCGCTCCTACATCTGTGATTTAACCGAAGAAATGTGCTggcttttaatcattttaagtgtttaaaactcGTTAGAGAATTACACGGAAGATACATTGTTAGCCGATGTAACACTGTGATGCGTTATTTAGTGACATTGCGGTCCCTGTTTAGTAAATAATTTAGCTTAAACGAATTCTTCCACTGGTAAGTGTTGATAGAAACTGAATCAATTGATTCACGAGACGATTCACTGATTTGAATCGATCGAATCGCCGCGCGTCGATGACTCTTGCTGCTCAAAACAACGAACACGTGATAATGAAAACTTTTACACACAAACTGcagctgtttttattaaagtgtgatctgttaaataatttacaagTCAGTAAATActaaatagaaatacaaatgTGAAAGTTGTGAATGATATGTGTCTTATGTGCTAgttttggttgtttgttttcatcaggTAATTCTTGAGGTAAATCTGAACTACAGATTTGGTTTGGattcataatttctttcttctgttatttattcttttcttaAACAGTCCaaaatcacagaaaaacacCCGGAGAAACAGCCGAGATCCACGTGGCACTAATATAAAGATGGCATttgttaaagaggagagtgaagacgTGAAGATTGAAGAAACATTCAGAGTCAAACATGAAGAtactgaggaacaaacagACCTGACAacactgaaagaagaaagccatctTCTCAATGAAGAAAACGACGACTCTCATtctgaaaagattaaaaaaagagatcaaaAGACAGCAAATAGAATATATTtgacctgccaacagtgtggaaagatcttcaaaaaaaaatctgacctCAAGGTCCACTtgagagttcacactggagagaagcctttcaccTGCCAACATTGTGGTAAGAGTTTCAACAGAAAAGGAAACATTGAAGTTCACCTAAGAGGtcacactggagaaaaaccttttacctgccaacagtgtggaaagggTTTTATTCGAAAAGCAGACCTTACATATCACACgagagttcacactggagagaaacccttcacctgccaacagtgtggaaagagttttactaAACAAGGAAACCTTAAAGAGCACATAAGAATTCAttctggagagaagccttacaccTGTAAGCTGTGTGGAAAGAACTTCATTCGAAAACCACACCTTACAAaccacatgagaattcacagtGAAGAGAAGCCTTACATGTGCCCTCaatgtggaaaaagttttacacaaaaacaacacctcATTGTCCACATaaggattcacaccggagagaaacctttcagctgccaacagtgtggaaagagtttcactgAAAAAGGAACCCTTAGAAAACATATAAAGATTCACACGCGAGAGAAGGCGTTTACAGGTGATCAGAGTTTCAGACGTGAAGTAGGTCTTTAACATGTTGTGATTTACTGTTCAGTGTGCTACTTGATCAACTGCCAAGTTAAaataaccctaacccctaacccggATATGCTCATATGTATTTGTCATTTGTgtgctttaataaaatcaaaggtCTAAAAATCCTTAAAGTGTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44912 False 325 lncRNA 0.40 2 21052978 21053654
XM_043237423.1 True 1655 mRNA 0.38 2 21048857 21053725

Neighbor

gene id symbol gene type direction distance location
LOC122342968 NA coding downstream 10458 21030443 ~ 21038399 (-)
LOC122342960 NA coding downstream 86334 20949743 ~ 20962523 (-)
LOC122342953 LOC107575420 coding downstream 133017 20907255 ~ 20915840 (-)
LOC122343141 NA coding downstream 157182 20888926 ~ 20891675 (-)
LOC122342999 NA coding downstream 177163 20865561 ~ 20871694 (-)
LOC122342284 NA coding upstream 17647 21071372 ~ 21081090 (-)
LOC122342959 LOC107575420 coding upstream 178035 21231760 ~ 21247753 (-)
LOC122342288 LOC107667978,LOC107563545 coding upstream 196674 21250399 ~ 21276097 (-)
LOC122342980 LOC107571898 coding upstream 228562 21282287 ~ 21288322 (-)
LOC122342290 LOC107561645,LOC107741456 coding upstream 255807 21309532 ~ 21313970 (-)
G30317 LOC107561645,LOC107575420,LOC107747810,LOC107575457,LOC107741456,LOC107667978 non-coding downstream 74792 20972276 ~ 20974065 (-)
G30293 NA non-coding downstream 311697 20736146 ~ 20737160 (-)
G30286 NA non-coding downstream 370993 20676260 ~ 20677864 (-)
G30273 NA non-coding downstream 398025 20650106 ~ 20650832 (-)
G30272 LOC107561645,LOC107750396,LOC107727338,LOC107734660,LOC107575457,LOC107569100 non-coding downstream 403322 20644964 ~ 20645535 (-)
G30301 LOC107707774,LOC107566977,LOC107677745 non-coding upstream 12189 21065914 ~ 21068188 (-)
G30343 NA non-coding upstream 64090 21117815 ~ 21126071 (-)
G30394 NA non-coding upstream 324857 21378582 ~ 21765825 (-)
G30406 NA non-coding upstream 438539 21492264 ~ 21492907 (-)
G30408 NA non-coding upstream 445913 21499638 ~ 21499998 (-)
LOC122343123 NA other downstream 184451 20858423 ~ 20864406 (-)
G29906 NA other downstream 766457 20281106 ~ 20282400 (-)
G29902 NA other downstream 810303 20237137 ~ 20238554 (-)
LOC122343146 NA other downstream 1039145 20000988 ~ 20009712 (-)
LOC122342243 NA other downstream 1711365 19333729 ~ 19337492 (-)
LOC122343113 LOC107749046 other upstream 222497 21276222 ~ 21279043 (-)
LOC122343135 NA other upstream 273890 21327615 ~ 21336881 (-)
G30395 NA other upstream 329744 21383469 ~ 21386437 (-)
LOC122343153 NA other upstream 334128 21387853 ~ 21783591 (-)
G30396 NA other upstream 575892 21629617 ~ 21776806 (-)

Expression


Co-expression Network