G30423 (LOC107575420,LOC107667978,LOC107563545)


Basic Information

Item Value
gene id G30423
gene name LOC107575420,LOC107667978,LOC107563545
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21676876 ~ 21809618 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45059
aaatcatttaattaaacagcagtcagtgaaatactcacagagcgtttctgcagcatctcacaGCTGGAATGAGTCTCCTGCAATCTGATTGTTCTGATGTGAACCTCTTTGGGTTGAACTCATCCAGCACCTTCTCTGACATCAGTAGTATGTAGGTCAGCACTGTGCACATTGAAGACGAGAGATCTCTTCCtggatgttcatttgaactgagGTAACTCTGTATTTCCTCATATAATGAATGATCTTTGAGCTCAAGTAAGCAGTAGAACAGGTTGACTGAAGCTTCATCTGAGATGTCCTGTTGTTGTAATTCTTTAATGTGTGCACTTAGATTTCTGATGCTCTCTGTGGTGTCTTCAGTCTGTGTGATCAGGCCTTTGAGCAGATTTTGACTGGATTCCACTGAAATTCCCATCAGAAACCGCAGGAACAGGTCCAGATGCCCTCTCTTACTCTGCATTGCTTTTTCAATTGCTCTCTCTGTTAAGTCATGCAATTTGACCTTTCTAAAAGGAAATGTAAGATTTTGTATGACTGTAGTTTGTGAATCCTCAAAGAAAAACGTAAgcccttgcttgttttttttcaggtaacagatgaacacatgcactgcagcaAGGAACTCTTGAACACCCAGATGCACAAAGCAGAAGACCTTTGTCTTATAAAGTCCAACTTCCCTCTTAAAGATCTCAGCGATCATTCCTGTGAACTCAGCATCTTTACTCACATCAATACCACATGCTTTCAGATCTTTCTCatagaacacaatgttttcctgCTTCAGCTGTTCAAACGCTAGCTTGGCTAACTTCAGAATCatctttctatttaaaagtaaGTGCTCTGAACATTCTCCTTGTTGTTTGCCATATTTCTGACTCTTCATGTTCATCTGTATCCTcaggaagtgaatgtacatttcagtgagtgttgtgctgatgttctcttcattgttctcagtgagaatatcctgaagtactgtggctgtgatccagcagaacacaggaatgtggcacatgatgtagagacTACAAGACGTcttaatgtgtgagatgattctggaggACACACTCTGATCTTTGAATTTCTTTCTGAAGTACTCCTCCTTCTGTTGGTCAGTGAATCCTTTCACCTCTGTGAACAATCCTACATACTGAggagggatctgattggctgctgctggtcgtgATGTGACCCAGACCAGAGCTGATGGAAGCAGTTTACCTTTGACCAGACTTGTAAAGAGCACATCTACAGATGATCTTTCCTCAACAGTGTTCATTGTATCACTTTCAAAATTCAAAGGCAGTCGACTctcatcaagtccatcaaatataaacacaagTTTATATTCTGTATAAAACTTTGATTTCTCCAGGTCCTTCAATTCAGGATTAAATTTCAGCAGAAACTCATGGAGACtgacctctctctctttaatcACATTGatctctctgaatggaagcAGGAACACACAGTCTATATCCTGATTAGATTCTCCTTCggcccagtccaggatgaacttgtgCACAGACACAGTTTTCCCAATGCCAGCGACTCCTTTGGTCAACACAATCTTTAACTCATTGTTTTTCCTCagttcagtaaatatatcattgcatttgattgttttgttcagtgtttttttgttcttgaaagCATCATCAATCTTCAGAATCTCATGTTCCTGATTTACATCTTTCATATCTCcctctgtgatgaacagatCTGTGTAAACAGCTTTCAGATCTGTGCCAGTTTCTTTGTTGccctcaaaaatgtattttaccttcatcttcatgttgtttttgtgagt

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45059 True 1822 lncRNA 0.40 3 21676876 21809618

Neighbor

gene id symbol gene type direction distance location
LOC122343036 LOC107563870,LOC107718524 coding downstream 14043 21655902 ~ 21662833 (-)
LOC122343099 NA coding downstream 22879 21651364 ~ 21653997 (-)
LOC122342299 NA coding downstream 46718 21629480 ~ 21630158 (-)
LOC122343039 NA coding downstream 134587 21537322 ~ 21542289 (-)
LOC122342973 LOC107685875,LOC107749047,LOC107728228 coding downstream 147930 21517473 ~ 21528946 (-)
LOC122342306 LOC107749047,LOC107728228 coding upstream 37502 21847120 ~ 21860284 (-)
LOC122343106 NA coding upstream 60797 21870415 ~ 21878792 (-)
LOC122343076 LOC107718513,LOC107692125 coding upstream 426139 22235757 ~ 22239007 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding upstream 506290 22315908 ~ 22320097 (-)
LOC122342947 NA coding upstream 515892 22325510 ~ 22334793 (-)
G30425 NA non-coding downstream 745 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 3452 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 176878 21499638 ~ 21499998 (-)
G30406 NA non-coding downstream 183969 21492264 ~ 21492907 (-)
G30343 NA non-coding downstream 550805 21117815 ~ 21126071 (-)
G30465 NA non-coding upstream 471054 22280672 ~ 22281189 (-)
G30499 NA non-coding upstream 549599 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding upstream 586900 22396518 ~ 22398023 (-)
G30506 NA non-coding upstream 615974 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 677157 22486775 ~ 22487119 (-)
G30395 NA other downstream 290439 21383469 ~ 21386437 (-)
LOC122343135 NA other downstream 339995 21327615 ~ 21336881 (-)
LOC122343113 LOC107749046 other downstream 397833 21276222 ~ 21279043 (-)
LOC122343098 NA other downstream 623151 21048857 ~ 21053725 (-)
LOC122343123 NA other downstream 812470 20858423 ~ 20864406 (-)
G30450 NA other upstream 318836 22128454 ~ 22245160 (-)
G30457 NA other upstream 406417 22216035 ~ 22216470 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1607273 23416891 ~ 23437015 (-)
G31017 NA other upstream 1668907 23478525 ~ 23546369 (-)
G31050 NA other upstream 1935868 23745486 ~ 23771768 (-)

Expression


Co-expression Network