LOC122342302


Basic Information

Item Value
gene id LOC122342302
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21769124 ~ 21772399 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45070
CTTGAAGATGCTGAAGAACCAACAGACTCAACAGTGCTGAAAGAGGAGCAGGAAGAAACTGAAGAGAAATATCAGTATGAGAACCCTCATGATTTCCTAGAAAAATCGTTTAGTAGTTTACAGTCCGAAAAGAGTTCCACACAAAAAAGGGATGGGATTCGTTTCCCCTGctttcagtgtggaaagagttttagtCGTAAGGCAACCCTCAAAAGCCACATGAAAACTCACCCTGAAGAGAATATGTTCACCTGCACACACTGTGGAAAAAGTTTCGGCACAAAATTGAAACTGAAATACCACACGAAAGTTCACAATGGAAACAAACCCTTCACGTGCAAACAGTGTGGAAGGAGCTTCACTCAGAAAGGAA
>XM_043236098.1
ATGGAGTTTCTGAAAGTGGAGCTTGAAGACGCGTTCACGGTCGAACCAGAAGATACTGAGACCCAGCTGAAGATGGTGTtcattaaagaggagagtgcaGGCAGGCGTGAAGAAACTTTCAGAGTCAAACTTGAAGATGCTGAAGAACCAACAGACTCAACAGTGCTGAAAGAGGAGCAGGAAGAAACTGAAGAGAAATATCAGTATGAGAACCCTCATGATTTCCTAGAAAAATCGTTTAGTAGTTTACAGTCCGAAAAGAGTTCCACACAAAAAAGGGATGGGATTCGTTTCCCCTGctttcagtgtggaaagagttttagtCGTAAGGCAACCCTCAAAAGCCACATGAAAACTCACCCTGAAGAGAATATGTTCACCTGCACACACTGTGGAAAAAGTTTCGGCACAAAATTGAAACTGAAATACCACACGAAAGTTCACAATGGAAACAAACCCTTCACGTGCAAACAGTGTGGAAGGAGCTTCACTCAGAAAGGAAGCCTTAAGAAGCACATGGCCATTCACACTGGAAAGAGGCCTTACAGCGtgccctcagtgtggaaagagcttcagTCAAAGGGAGGCCTCAAGAAGCACATCTCAACTCACACAGGGGAGAAGCCTTTCACATGCCCTCGgtgcggaaagagtttcagCCAAAAGGGAGGCCTTAAGATCCACATgaggattcacaccggagagaagccgttcacATGCcctcagtgcggaaagagtttcagtCAAAAGGAAGGTCTTAAGAAGCACGTGACGATTCAcacggagagaagccttacgcGCGTGCCCTCGGTGCGGAAAGAGCTTCAGTCAGCGAGGAAGCCTCGAGGgccacatgagagttcacaccggagagaagccgttcacATGCACTCACTGCTTGAAGAGTTTCAGTCACTCCGGATCCCTCAGATACCACATCATGAAAGTTTGCAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45070 False 373 lncRNA 0.42 2 21769579 21772200
XM_043236098.1 True 957 mRNA 0.48 3 21769124 21772399

Neighbor

gene id symbol gene type direction distance location
LOC122342300 LOC107575420,LOC107563545,LOC107575457,LOC107741456 coding downstream 32583 21714679 ~ 21736541 (-)
LOC122343036 LOC107563870,LOC107718524 coding downstream 106291 21655902 ~ 21662833 (-)
LOC122343099 NA coding downstream 115127 21651364 ~ 21653997 (-)
LOC122342299 NA coding downstream 138966 21629480 ~ 21630158 (-)
LOC122343039 NA coding downstream 226835 21537322 ~ 21542289 (-)
LOC122342303 NA coding upstream 2699 21775098 ~ 21780619 (-)
LOC122342306 LOC107749047,LOC107728228 coding upstream 74721 21847120 ~ 21860284 (-)
LOC122343106 NA coding upstream 98016 21870415 ~ 21878792 (-)
LOC122343076 LOC107718513,LOC107692125 coding upstream 463358 22235757 ~ 22239007 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding upstream 543509 22315908 ~ 22320097 (-)
G30394 NA non-coding downstream 3299 21378582 ~ 21765825 (-)
G30425 NA non-coding downstream 92993 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 95700 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 269126 21499638 ~ 21499998 (-)
G30406 NA non-coding downstream 276217 21492264 ~ 21492907 (-)
G30465 NA non-coding upstream 508273 22280672 ~ 22281189 (-)
G30499 NA non-coding upstream 586818 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding upstream 624119 22396518 ~ 22398023 (-)
G30506 NA non-coding upstream 653193 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 714376 22486775 ~ 22487119 (-)
G30372 NA other downstream 28794 21737091 ~ 21740330 (-)
G30395 NA other downstream 382687 21383469 ~ 21386437 (-)
LOC122343135 NA other downstream 432243 21327615 ~ 21336881 (-)
LOC122343113 LOC107749046 other downstream 490081 21276222 ~ 21279043 (-)
LOC122343098 NA other downstream 715399 21048857 ~ 21053725 (-)
G30450 NA other upstream 356055 22128454 ~ 22245160 (-)
G30457 NA other upstream 443636 22216035 ~ 22216470 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1644492 23416891 ~ 23437015 (-)
G31017 NA other upstream 1706126 23478525 ~ 23546369 (-)
G31050 NA other upstream 1973087 23745486 ~ 23771768 (-)

Expression


Co-expression Network