G30450



Basic Information


Item Value
gene id G30450
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22128454 ~ 22245160 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU45110
CGGCTTACGCTGTGCTAGCTCTTATTAAGGCAAAAGAGTTTGACAAAGCAGCAAGGGCAGCGCACTGGCTTTCCAGACAACAGTCTCACTATGGGGGTTATGACTCCACTCAGTCAACCATCATGGCGTTTCAGGCCTTGGCAGAGTATCACACACAGGTAAAAGACCGGCAGAACTTTAGTCTGGAAATAGACTTGGCAATGGcaagcagagaaaaacaagtcaaatcACGTTATCAGAAGACATAACGCACATCACACGCGGTCAAACAGGGTGGCGATAAACGAGAATTTCAATATAACCGCTAAAGGATCCGGAAAAGCCATTCTATCGATTCTGTCGCTGTACTACGCCAGACCTACTGAAAAGAAATCGGACTGTAAATTCTTTGACCTGACTCTTAAAATGGAGAAAGATGATGCTATTAAGACAAACAAAGAAGACATTGACACTACAAGCTCACTATGGAATTCATgtacaaaaacaacaaaaccgaTGCCACCATGACTATTTTGGATATTGGCATGCCGACTGGATTTACCGCCGACGAAAATGATCTTAAATCGCTGTCCACAGGAAAGGACAGATACGTTCAGAAAGTGGAAAATAACACTGTGCTCTCAGAGCGAGGATCCCTCATCCTCTACTTGGATAAGGTTTCTCATAAAAGGCAGAAAAATTGCCTTCAGAATGCACAAGCTGTTTAATGCCGGTCTCCTACAACCTGCCACAGTCACAGTATATGAATATTACTCACCAGATGCACGCTGTACAAAGTTCTACCACCCCGAAAGGAAAGATGCCATGACACACAGATTGTGTGAAGGAAGACCTGTGCCAGTGTGCAGAAGAAGGTTGCAGTTCCCAGAGGAAACATGTCAAAGACCAGGATCGTTTTGATAAAGCCTGTGAACATGGCATGGATTATGTTTATAAAGTTAAAGTGGAGGAGATGGATCTGAAACCCACAATTCACATCTATGACATGAAGGTGGAGCAGGTCTTGAAAGAAGGTATGGTTCATTATCCTTTCCATG

Function


GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0019538 protein metabolic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0044238 primary metabolic process biological_process
GO:0006508 proteolysis biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0006807 nitrogen compound metabolic process biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA


RNA id representative length rna type GC content exon number start site end site
TU45110 True 1037 TUCP 0.44 12 22128454 22245160
Loading

Neighbor


gene id symbol gene type direction distance location
LOC122343106 NA coding downstream 249662 21870415 ~ 21878792 (-)
LOC122342306 LOC107749047,LOC107728228 coding downstream 268170 21847120 ~ 21860284 (-)
LOC122342303 NA coding downstream 347835 21775098 ~ 21780619 (-)
LOC122342300 LOC107575420,LOC107563545,LOC107575457,LOC107741456 coding downstream 391913 21714679 ~ 21736541 (-)
LOC122343036 LOC107563870,LOC107718524 coding downstream 465621 21655902 ~ 21662833 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding upstream 70748 22315908 ~ 22320097 (-)
LOC122342947 NA coding upstream 80350 22325510 ~ 22334793 (-)
LOC122342948 LOC107575457,LOC107741609 coding upstream 140703 22385863 ~ 22395600 (-)
LOC122343006 NA coding upstream 183914 22429074 ~ 22431623 (-)
LOC122343060 LOC107677814 coding upstream 250126 22495286 ~ 22499529 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 318836 21676876 ~ 21809618 (-)
G30394 NA non-coding downstream 362629 21378582 ~ 21765825 (-)
G30425 NA non-coding downstream 452323 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 455030 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 628456 21499638 ~ 21499998 (-)
G30465 NA non-coding upstream 35512 22280672 ~ 22281189 (-)
G30499 NA non-coding upstream 114057 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding upstream 151358 22396518 ~ 22398023 (-)
G30506 NA non-coding upstream 180432 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 241615 22486775 ~ 22487119 (-)
LOC122343153 NA other downstream 344863 21387853 ~ 21783591 (-)
G30396 NA other downstream 351648 21629617 ~ 21776806 (-)
LOC122342302 NA other downstream 356055 21769124 ~ 21772399 (-)
G30372 NA other downstream 388124 21737091 ~ 21740330 (-)
G30395 NA other downstream 742017 21383469 ~ 21386437 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1171731 23416891 ~ 23437015 (-)
G31017 NA other upstream 1233365 23478525 ~ 23546369 (-)
G31050 NA other upstream 1500326 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1865064 24110224 ~ 24110673 (-)
G31134 NA other upstream 2058936 24304096 ~ 24497596 (-)

Expression


G30450 Expression in all Baseline Samples

Bar chart with 10 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 80.
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G30450 Expression in each Bioproject

Bar chart with 2 bars.
G30450 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 500.
End of interactive chart.

Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G312957 NA non-coding NW_019172864.1 APWO02000064.1 422598 ~ 436878 (-)