G30506


Basic Information

Item Value
gene id G30506
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22425592 ~ 22428757 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45181
ggtTGTAACATAAATCACAGCAggatgtataatttaatttaaaatgatgcacttttgtttttgaggctaatgtgagctagctaatactttcaactgaacaaaaatgcaaagtttGTTATATAAACCTATTAGCAGACTTAGGCAGGGTAGGTAGATACTTTGTTCTTGTACAATGTATCCTATACTCAGTATGCTGGGAAACCTGAAGAGAAAAGCTGTTACTCTGAAGGGTAGTTCAGACGTATTGATTAAAAAACTCTTCACAACACAAATGACACGAACACCATTTTAATCCAAAGTGATTTGGATATCATATTCTCTCTGAAGatcatgtttttctgtgtccaaatCCTTGTCTTCAGAAGCAATATAATACATTAGTGagatatcaatatttatttagattttcaccATAAATCCCCACTTTCCCATCTGAAAATCATATGAGGAACCTGTATATTTTTCCTTTCATATGTAAAAGTAAGTAGAGTTCAAGCACTAGAGTATCCGTTTCATGGTATCTGTTACAGATcagcattagaatgatttccgaaggatcatatgacagtgaaaactgaaatgaggctaaaaaaaatcagctttgcatcataggaaatagtaatattaattaaaataatcttcaCTTGAAGTCACAATAGAGTCACAATAGATTCATTATGAACATGACGAGCGAGCTGAAAGGTTTTTGGCCTTTAAACTTAATCTGCAGCAGCTAGTTTTGCACCAGAAAACCACGATAACCGATACAGAGTCGTAATCCTCCGTCCTTCTTTTCCACGAAGAAGAAACCCGCGGCGGCTGGGTAAGTAGAAGGTTGGATGAAACCAGATTTGAGAGCCTCTGAAATGTATTCCTCCATAGCTAGACTCTCAGTTCGTGACAGTGGTTAAGCTTTACACAGAATTAAATCCCAAAACACCTTCAAGCCCCAGAGGTTTAAGCAAGTCTAGATGATTTAAGATGGCTAAATTAATCAAACGTTATCAAATCAACTGACTGCTGCTATCTACATGGTCAAAAAAAACAAGGGCTGGTTATAGGGCCTAGGTTTGAGGCCTGTGCAGGTCTATACCAGATATTTGCCTTTGGAAATgattgttgtaatatttttctaaaaaccgacaaaatttttaatttgttttgtgtctaattcttttttttttttgcctaaacTTTGTATGCTAAACCATATTAtcattaattttgtattataaaacaattatatttaaaacataacatgGTTTAATTAATGCAAAGAAACAATAAAGGTTTTCTAAATTTAGGGACATAAGTTttcataatttgcataattgtcATCTGCTTTAGATATGGGaacaaatgtgttaaaaaaaaaaactaaataaccaATAAGTATTTGTGACCTGCTGAAATACATAAGccaattattaaatgtaattttcaagCCTTTCATAATTTgtgacataaaataataatcattaatacaACATAAGGAAATAATGACCCATAACATGCATTAAGAGCTTTTTATGTacatgtaattgttttattctgACTATTACGTTTTGAAATTAACTTTATAgaaattcatttcaaaataattttctaatcatttttaattataatgttgtattttaaacTTGTTGTTCTATTTCGTTACTAGATCTTTGGGTAGTTTGCAAACTCTTTTGCGCTACCTGATTGCAGTTTTGTGAACAACTTTACCATGGGACTGACTTGCAGTTAATGCCATGGTCCTGCGGCACACGTGGTAGTAGTATGCTTTTCTGCTCTTAATTTCTGCTGCAGATGAAGTTGAGTTTGTGAGATTCAGGAAGGCTGATCCAGAGCTGATCTCCTCCAGACTGAACGGCTACTTTTCTCTTCTCGAGTTTGCAGTTTTCTTGCGTCGTTCCGTTCCCTGGAGCCCATTTCTGATAACACACGATCTCTCCACTCAGCCAGAGCCACATGTTCATGACGCAGTAGTTGTGTGTAAACCCATCCACACCGCTGCAGTAGACGCCCGTTTAACCACGTTCTTCACACGATGCTGCATCTCTTCTGAATGAACTGAGACCAGATCCACGTGATTCTGTCTGCAGTATCTCAGAGCTTCGGCCCACGTCACATTCTCTCTGATCAGAATCAGTTCAGCGTCTGGACACAAAATACACCAAAAGCAGAAACTAGAGAGAGTCTGATCAAAATCAACAGGTAAAACAAGACACTGAGGATGAATTTGTGATGTCAGACATGTAGTGAGAACTTGGTGTATTCACACCTGTTTTGTTTCGTTCGATTGAAACAAACTCAAGTTCGTTTCCCCCTGCAGTGCGGACCTTTTGGGCAGGTGTGAATACAGCAATAACACTCTGGGTCGCAACAAACAATCGAAGGTGTTCGATGTGACCCAATTGCAGTTAACAGGCTCCCGTAGTTGGAGTTATGGGAAAGTGTTGCTAGCCAAAATGAAACGTATGCAAAACCTGCAATTGCTTTCCTATACGCACTGTATACTGTCAGTATGCCACATATAAGAATATACAGACTCCACGGATTCATATTACGTTAACGTAATAACAAATACCAACTGCACTACAAAAACTCTCCATGTTTTCGAACTtcctgttttttcctgtttgagaatttacaaaccaaaccaaaagaaataaacattgtaTTCGGTCCGGACCGAAGCAAGTGAACTAGCAGACTTTGCTGGTCTGAATATACCATAAGATATCTGGAGCTGATGATGGATTGTGGGTGTTTTGTGAGGACCTGCTCACCTTCATAACACACAAAAGGATATTGATCAGTGCAAGGGCAGTCATGCCATTTTCTTTCAGCATTCGATTGACTCATTGTACAATTTTCACCATTTCTAAACCCATTAGGTTGATCGGACTTCCAGTATCTGAATGAGGAGTCGCTCTGATCTGACCACTGCCATGAGTCTTTGACTCTGAACAGACCGATCCAGATCCGTGATCCAGGTAAGAGTCTATCACTGATGATCTTCTGAACCTGTTGATTCTCATTCTGGTTCCTCACACTGACCAGATCCGTGTGATTCTGTCTGCAGTAACTCTGAGCGTCACTCCAATTCATCGCCTGATTGACAAAGACGAGTC

Function

GO:

id name namespace
GO:0044425 obsolete membrane part cellular_component
GO:0044459 obsolete plasma membrane part cellular_component
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component
GO:0098797 plasma membrane protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45181 True 3137 lncRNA 0.38 2 22425592 22428757

Neighbor

gene id symbol gene type direction distance location
LOC122342948 LOC107575457,LOC107741609 coding downstream 29992 22385863 ~ 22395600 (-)
LOC122342947 NA coding downstream 90799 22325510 ~ 22334793 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding downstream 105495 22315908 ~ 22320097 (-)
LOC122343076 LOC107718513,LOC107692125 coding downstream 186585 22235757 ~ 22239007 (-)
LOC122343106 NA coding downstream 546800 21870415 ~ 21878792 (-)
LOC122343006 NA coding upstream 317 22429074 ~ 22431623 (-)
LOC122343060 LOC107677814 coding upstream 66529 22495286 ~ 22499529 (-)
LOC122342313 LOC107703281,LOC107657504,LOC107693510,LOC107570418 coding upstream 139467 22568224 ~ 22577494 (-)
LOC122342314 LOC107575554,LOC107666720 coding upstream 149589 22578346 ~ 22585463 (-)
LOC122343061 LOC107677814 coding upstream 158966 22587723 ~ 22593908 (-)
G30499 NA non-coding downstream 3639 22359217 ~ 22421953 (-)
LOC122343195 NA non-coding downstream 27569 22396518 ~ 22398023 (-)
G30465 NA non-coding downstream 144403 22280672 ~ 22281189 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 615974 21676876 ~ 21809618 (-)
G30425 NA non-coding downstream 749461 21673723 ~ 21676131 (-)
G30518 NA non-coding upstream 58018 22486775 ~ 22487119 (-)
G30520 NA non-coding upstream 58663 22487420 ~ 22488169 (-)
G30525 NA non-coding upstream 71405 22500162 ~ 22501174 (-)
G30547 NA non-coding upstream 140878 22569635 ~ 22570058 (-)
G30920 NA non-coding upstream 342098 22770855 ~ 22772854 (-)
G30450 NA other downstream 180432 22128454 ~ 22245160 (-)
G30457 NA other downstream 209122 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 642001 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 988134 23416891 ~ 23437015 (-)
G31017 NA other upstream 1049768 23478525 ~ 23546369 (-)
G31050 NA other upstream 1316729 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1681467 24110224 ~ 24110673 (-)
G31134 NA other upstream 1875339 24304096 ~ 24497596 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location