CI01000004_08233410_08241216


Basic Information

Item Value
gene id CI01000004_08233410_08241216
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8233178 ~ 8241319 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_08233410_08241216.mRNA
AGCCGGTACAGACTCAGATTAGGGCAAATCTTAACACGCAGAGCAGAAACGTGAGAGGGCCCATACGCACGGAAACTTGGGTTGTTTTGTTAGTTTCAGCACTATGGTAAACAGAGCAGGAATGACATCTTGTTTCCACTACCTTGTTTCAACTCTTCTGTTAAACTGCCCACAAGGCATAAGTAACCACAGGGAAAGAAGAGAGGCAAAACTGAGAGGAACGCTGATGCTGCAAAGCGACAGAAAAGACAAGTCAGTGACAAAGCTCCACACTAAAAAGCACTATGAAGTTCACAACATCCATACAGGAAGGGTTCTTCTCAGGTGTCACCATACAATGAAAGCTGGACCCTGGGGAATATTCTGTAGAGACATTCAAATCAGAATAGTCAGGAGGGTACTCGAATTTGGTGGGAAACCGGCTCTCGCACGTCTCCCATTAAGCTCCCTGCACCCAACAATAGGTATTGAAAAGAGGGGAGCAGAAAGCCTGGCCCCAGAGTGGAGCACCTTTGTGCAGGCAGCTCAGGGTGAGCAACACCTTACAGTACCTCACCTGGCTTCCAGCAAATACCAGTCACTTGCAGAAAAATATCCAGGGTTCTTGAGTTCTGACATGTCCAGACCTGGCCTTGACAAATGGCAGCCTCAGCATTTCGTTCTTCCAAATCTACAAGTTTTATTGTACCACCATGAATGCACAGTTCAGAGTCATCATTGTCTCTCTTCAAATCTGTTAAAAAACAAAATCTCAGACCCTGTCAGTCTTTTAGCCCTAATCAAAAACATTCACATTCCAAACCAACCACACTGAAGCTGTAGAAAAATTCCTCCAGCCTCATAAAGGCAACCAAGCAAATGTTCCCAAAAGTTTTCAAAGGCATATTTTTGGAGAGAACGTGCTTTCCTTCAAACTGCTGGAACATCAGCTGGCACCAGCTTCTGCCTAACCAAGTGGTCCATGAAAACAACACTAAAAGAGCTGTGGCTTGTTCTGAGTAGGTGGATCTACATTTCTAGAGGTCCACTGACTTAAATGCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_08233410_08241216.mRNA True 1046 mRNA 0.45 5 8233178 8241319

Neighbor

gene id symbol gene type direction distance location
CI01000004_08113788_08117378 NCEH1A coding downstream 115099 8113374 ~ 8118079 (-)
CI01000004_08103263_08106420 PCCB, PCCB.L coding downstream 126758 8103263 ~ 8106420 (-)
CI01000004_08049634_08054074 NA coding downstream 178667 8049137 ~ 8054511 (-)
CI01000004_08030758_08033803 SLC35G2, SLC35G2A, SLC35G2B coding downstream 199375 8030511 ~ 8033803 (-)
CI01000004_08010634_08013275 NCK1A coding downstream 219903 8009859 ~ 8013275 (-)
CI01000004_08249849_08251049 NA coding upstream 8349 8249668 ~ 8251307 (-)
CI01000004_08258929_08273708 NA coding upstream 17459 8258778 ~ 8273799 (-)
CI01000004_08361560_08363939 GHSR, GHSRA coding upstream 119949 8361268 ~ 8364019 (-)
CI01000004_08587419_08590454 NA coding upstream 346008 8587327 ~ 8590557 (-)
CI01000004_08592797_08594424 CLDN11A coding upstream 350995 8592314 ~ 8594619 (-)
G29663 NA non-coding downstream 207978 8023951 ~ 8025200 (-)
CI01000004_07998445_08008810 HLTF non-coding downstream 234864 7997249 ~ 8008810 (-)
CI01000004_07960123_07960701 NA non-coding downstream 271970 7958746 ~ 7961208 (-)
G29562 NA non-coding downstream 329081 7899358 ~ 7904097 (-)
G29750 NA non-coding upstream 95850 8337169 ~ 8339546 (-)
G29829 NA non-coding upstream 117584 8358903 ~ 8359102 (-)
G29833 NA non-coding upstream 127831 8369150 ~ 8371242 (-)
G29844 NA non-coding upstream 169407 8410726 ~ 8411219 (-)
G29865 NA non-coding upstream 181743 8423062 ~ 8432906 (-)
G29656 NA other downstream 267678 7964364 ~ 7965500 (-)
G29388 NA other downstream 1601271 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 1687606 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 2605664 5616644 ~ 5628289 (-)
G27746 NA other downstream 3029454 5178227 ~ 5203724 (-)
G29746 NA other upstream 113179 8354498 ~ 8358127 (-)
G30316 NA other upstream 1136618 9377937 ~ 9406921 (-)
G31203 NA other upstream 2505118 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 3166146 11406957 ~ 11412907 (-)
G32150 NA other upstream 3535200 11776519 ~ 11780951 (-)

Expression


Co-expression Network