LOC122342317


Basic Information

Item Value
gene id LOC122342317
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22777983 ~ 22780139 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45293
CCGCGCTCTCGCTCCCGTGATTGCGGCTGAAGAAAGGTGGAAAACAGAAGAAAGTGTCCAAACACAGAACCATTCCTGGTGGATCGGCTCTCATACTATCACAGAGATGGCGTCTATTAAAGAGGAGAGCGAAGAGATCAAGATTGAAGAAGTGTTCAGAGTCAAGCTTGAAGATACTGAGCAACAAACGGTCCCAATGGCGTTCAAAAAGGAAGATCAAGAACTGGATGAAGAGCAGGAGAAAGATCAGTGCAGTATGCAACAGGATTTCATGACCGGCGAAAAACCCAGACAGGCTGAAAAGATCTTGTCTCGAAAAAGAGCTCAGAAGACCAAACCCAACCGGACAGCGAAACAAAACCGCCAGGTCCAGAAGAGCGCTCCCACTGGAGAGGCGGCGTTTGCGTGCGAccagtgtggaaagagcttctCAGACGCCAAGCGCCTTAAAAGACATGTACCGATTCACTCCACAGAGAAACCCTTCACGTGCCAGCAGTGTGGGAAAACGTTCAAGTTGAACAAATACCTCTTGACTCACAAGACGGTCCACACCAAAGAGAGGCCCTTCACCTGCACAcagtgcggaaagagcttcTCGCAAGAGGCACATCTGAACAATCACTTGAAGGTCCACGCCAGACAGAAGTCCATCGCGTGCCAGACgtgcggaaagagtttcacACACAAAGGAGATCTTAAC
>XM_043236110.1
ATGGTTTTAGCCAAAAAGACCTTTATTTTGGAGCGGCGCTGTGAGGTCATATGCGCGCGCCGCGCTCTCGCTCCCGTGATTGCGGCTGAAGAAAGGTGGAAAACAGAAGAAAGTGTCCAAACACAGAACCATTCCTGGTGGATCGGCTCTCATACTATCACAGAGATGGCGTCTATTAAAGAGGAGAGCGAAGAGATCAAGATTGAAGAAGTGTTCAGAGTCAAGCTTGAAGATACTGAGCAACAAACGGTCCCAATGGCGTTCAAAAAGGAAGATCAAGAACTGGATGAAGAGCAGGAGAAAGATCAGTGCAGTATGCAACAGGATTTCATGACCGGCGAAAAACCCAGACAGGCTGAAAAGATCTTGTCTCGAAAAAGAGCTCAGAAGACCAAACCCAACCGGACAGCGAAACAAAACCGCCAGGTCCAGAAGAGCGCTCCCACTGGAGAGGCGGCGTTTGCGTGCGAccagtgtggaaagagcttctCAGACGCCAAGCGCCTTAAAAGACATGTACCGATTCACTCCACAGAGAAACCCTTCACGTGCCAGCAGTGTGGGAAAACGTTCAAGTTGAACAAATACCTCTTGACTCACAAGACGGTCCACACCAAAGAGAGGCCCTTCACCTGCACAcagtgcggaaagagcttcTCGCAAGAGGCACATCTGAACAATCACTTGAAGGTCCACGCCAGACAGAAGTCCATCGCGTGCCAGACgtgcggaaagagtttcacACACAAAGGAGATCTTAACACCCACATGAGCCTTCACACCGGTGCTTGGAAGGACTTTCGCTGGCGGCAGCCTTCTCAAGGTTCACGTAACGGCTCACGGCGGAGAGAAGCCGAACATGTGCCATCactgcgggaagagcttcacgaGCGCTACACCCTTAAGAATCACATTCGggtccacaccggagagaagcccttcaCCTGTGCCCAGTGCGGAAGGAGCTTCGCCGTTAAAGAAAACCTGCGGACTCACAAGAGAATTCACTCTGGGGTCAAGCCGTTCACCTGCCAGCACTGTGGAAAGAGTTTCGTACTGAAGGGAAACTTTAAGAGACACGTGTGGCGTCCACACGTGAAAGCGGAAGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45293 False 703 TUCP 0.50 3 22778042 22779597
XM_043236110.1 True 1113 mRNA 0.52 4 22777983 22780139

Neighbor

gene id symbol gene type direction distance location
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 29363 22739960 ~ 22748620 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 71489 22695800 ~ 22706494 (+)
LOC122343101 NA coding upstream 88304 22685702 ~ 22689679 (+)
LOC122342965 NA coding upstream 156097 22613115 ~ 22621886 (+)
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding upstream 216220 22548617 ~ 22561763 (+)
LOC122343008 LOC107575457 coding downstream 388016 23168155 ~ 23183546 (+)
LOC122343131 NA coding downstream 446072 23226211 ~ 23229732 (+)
LOC122343152 NA coding downstream 571788 23351927 ~ 23375871 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding downstream 833339 23613478 ~ 23614930 (+)
LOC122342945 LOC107563545 coding downstream 853659 23633798 ~ 24144571 (+)
LOC122343204 NA non-coding upstream 226633 22550101 ~ 22551350 (+)
LOC122343169 NA non-coding upstream 234152 22542511 ~ 22543831 (+)
LOC122343193 NA non-coding upstream 236498 22540384 ~ 22541485 (+)
G30528 LOC107574372,LOC107655767,LOC107710146,LOC107574376,LOC107571418,LOC107574588 non-coding upstream 244951 22532415 ~ 22533032 (+)
G30526 NA non-coding upstream 271791 22505255 ~ 22506192 (+)
G30598 NA non-coding downstream 23899 22804038 ~ 23246017 (+)
G30599 LOC107561645 non-coding downstream 27849 22807988 ~ 23249868 (+)
G30607 NA non-coding downstream 73342 22853481 ~ 22869703 (+)
G30609 NA non-coding downstream 78151 22858290 ~ 22861570 (+)
G30624 NA non-coding downstream 226835 23006974 ~ 23126523 (+)
LOC122343019 LOC107705900 other upstream 95271 22661826 ~ 22682712 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other upstream 472835 22296897 ~ 22305148 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other upstream 546059 22231470 ~ 22231924 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other upstream 1016802 21368643 ~ 21761181 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 348967 23129106 ~ 23130189 (+)
G30632 NA other downstream 377420 23157559 ~ 23159756 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other downstream 383556 23163695 ~ 23168007 (+)
LOC122342976 usp15,LOC107685889 other downstream 1337150 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 1352911 24133050 ~ 24141446 (+)

Expression


Co-expression Network