G30636 (LOC107575420,LOC107667978,LOC107563545,LOC107741456)


Basic Information

Item Value
gene id G30636
gene name LOC107575420,LOC107667978,LOC107563545,LOC107741456
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23129106 ~ 23130189 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45355
aaaacattgtgttctatGAGAAAGATCTGAAAGCATGTGGCATTGATGTGAGTAAAGATGCTGAGTTCACAGGAATGATCACTCAGATCTTTAAGAGGGAATTTGGACTTTATAAGACAAAGATCTTCTGCTTTGTGCATCTGAGCGTTCAAGAGTTCCTCGCTGCAGTGCATGTGTTCACCTGTTACCTGAACAAGAACCAGCAAGAGCTTAAGTTTTTCTTTGAGAATTCACAAACTACAGTCATGCAAAATCATACATTTCTTTAGAAACGTCAAATTGCATGACTTAACAGAGAGAGCCATTGAAAAAGCAATGCAGAGTAAGAGAGGGCATCTGGACCTGTTCCTGCGGTTTCTGATGGGTATTTCACTGGAATCCAGTCAAAATCTGCTCAAaggcctgatcacacacactgaagacaCCACAGAGAGCATCAGAAATCTAAGTGCACACATTAAAGAATTACAACAACAGGACATCTCAGATGAAGCTTCAGTCAACCTGTTCTACTGCTTACTTGAGCTCAAGGATAATTCATTATATGAGGAAATCCAGAGTTACctcagttcaaatgaacatccaGGAAGAGATCTCTCATCTTCAATGTGCACAGTGTTGACCTACATACTACTGATGTCAGAGAAGGTGCTAGATGAGTTCAACCCAAAGAGGTTCACATCAGAACAATCAGATTACAAGAGACTCATTCCAGCtgtgagatgctgcagaaaagctctATTTGAAAGCTgtggttttgatgaaacatgctgtgaaaCTCTGTCTTCTGCTCTACAAACATCAAACCATCTGACAGAGCTGAACCTGAGCAGCAatcacctgcaggattcaggagtgaagctgctttctgatggactgaagagttcaCACTGTCGTTTAAACATACTGAGG

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45355 True 912 TUCP 0.41 2 23129106 23130189

Neighbor

gene id symbol gene type direction distance location
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 380486 22739960 ~ 22748620 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 422612 22695800 ~ 22706494 (+)
LOC122343101 NA coding upstream 439427 22685702 ~ 22689679 (+)
LOC122342965 NA coding upstream 507220 22613115 ~ 22621886 (+)
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding upstream 567343 22548617 ~ 22561763 (+)
LOC122343008 LOC107575457 coding downstream 37966 23168155 ~ 23183546 (+)
LOC122343131 NA coding downstream 96022 23226211 ~ 23229732 (+)
LOC122343152 NA coding downstream 221738 23351927 ~ 23375871 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding downstream 483289 23613478 ~ 23614930 (+)
LOC122342945 LOC107563545 coding downstream 503609 23633798 ~ 24144571 (+)
G30624 NA non-coding upstream 2583 23006974 ~ 23126523 (+)
G30607 NA non-coding upstream 259403 22853481 ~ 22869703 (+)
G30609 NA non-coding upstream 267536 22858290 ~ 22861570 (+)
LOC122343204 NA non-coding upstream 577756 22550101 ~ 22551350 (+)
LOC122343169 NA non-coding upstream 585275 22542511 ~ 22543831 (+)
G30637 LOC107741456,LOC107727338,LOC107685875,LOC107561645,LOC107563546,LOC107569100,LOC107670352 non-coding downstream 1125 23131314 ~ 23131705 (+)
LOC122343191 NA non-coding downstream 57127 23187316 ~ 23193862 (+)
G30652 NA non-coding downstream 133408 23263597 ~ 23264466 (+)
G30653 NA non-coding downstream 134344 23264533 ~ 23264741 (+)
G30654 NA non-coding downstream 135677 23265866 ~ 23266302 (+)
LOC122342317 NA other upstream 348967 22777983 ~ 22780139 (+)
LOC122343019 LOC107705900 other upstream 446394 22661826 ~ 22682712 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other upstream 823958 22296897 ~ 22305148 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other upstream 897182 22231470 ~ 22231924 (+)
G30115 NA other upstream 1487350 21639540 ~ 21641756 (+)
G30632 NA other downstream 27370 23157559 ~ 23159756 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other downstream 33506 23163695 ~ 23168007 (+)
LOC122342976 usp15,LOC107685889 other downstream 987100 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 1002861 24133050 ~ 24141446 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 1324081 24454270 ~ 24466400 (+)

Expression


Co-expression Network