G30637 (LOC107741456,LOC107727338,LOC107685875,LOC107561645,LOC107563546,LOC107569100,LOC107670352)


Basic Information

Item Value
gene id G30637
gene name LOC107741456,LOC107727338,LOC107685875,LOC107561645,LOC107563546,LOC107569100,LOC107670352
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23131314 ~ 23131705 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45356
TGTGGGTGTCATCTCACTGCTCTGTCCTGTGAAAGTTTATCTTCAACTTTACAAtcatcaaactctgtcctgagagagatggacctgagtaacaatgatctgcaggattcaggagtgaagcttcttTTGGATGGAAGGAAGAGTCCAAACTCTAAGCTGGAGATACTGAGattttccaCATGTAATCTCACCGTGGGAGTTTGTgggagtttgtcttcagttttacaatcctcaaactctgtcctgaaagagctgggcctgagtaacaatgatctgcaggattcaggagtgg

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45356 True 292 lncRNA 0.44 2 23131314 23131705

Neighbor

gene id symbol gene type direction distance location
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 382694 22739960 ~ 22748620 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 424820 22695800 ~ 22706494 (+)
LOC122343101 NA coding upstream 441635 22685702 ~ 22689679 (+)
LOC122342965 NA coding upstream 509428 22613115 ~ 22621886 (+)
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding upstream 569551 22548617 ~ 22561763 (+)
LOC122343008 LOC107575457 coding downstream 36450 23168155 ~ 23183546 (+)
LOC122343131 NA coding downstream 94506 23226211 ~ 23229732 (+)
LOC122343152 NA coding downstream 220222 23351927 ~ 23375871 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding downstream 481773 23613478 ~ 23614930 (+)
LOC122342945 LOC107563545 coding downstream 502093 23633798 ~ 24144571 (+)
G30624 NA non-coding upstream 4791 23006974 ~ 23126523 (+)
G30607 NA non-coding upstream 261611 22853481 ~ 22869703 (+)
G30609 NA non-coding upstream 269744 22858290 ~ 22861570 (+)
LOC122343204 NA non-coding upstream 579964 22550101 ~ 22551350 (+)
LOC122343169 NA non-coding upstream 587483 22542511 ~ 22543831 (+)
LOC122343191 NA non-coding downstream 55611 23187316 ~ 23193862 (+)
G30652 NA non-coding downstream 131892 23263597 ~ 23264466 (+)
G30653 NA non-coding downstream 132828 23264533 ~ 23264741 (+)
G30654 NA non-coding downstream 134161 23265866 ~ 23266302 (+)
G30658 NA non-coding downstream 142800 23274505 ~ 23282812 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 1125 23129106 ~ 23130189 (+)
LOC122342317 NA other upstream 351175 22777983 ~ 22780139 (+)
LOC122343019 LOC107705900 other upstream 448602 22661826 ~ 22682712 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other upstream 826166 22296897 ~ 22305148 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other upstream 899390 22231470 ~ 22231924 (+)
G30632 NA other downstream 25854 23157559 ~ 23159756 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other downstream 31990 23163695 ~ 23168007 (+)
LOC122342976 usp15,LOC107685889 other downstream 985584 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 1001345 24133050 ~ 24141446 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 1322565 24454270 ~ 24466400 (+)

Expression


Co-expression Network