G30658


Basic Information

Item Value
gene id G30658
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23274505 ~ 23282812 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45381
CGCGgaggcaacagtctaagcagggacgcccagacttccctctccccagacacttcctccagctcttcctggggaacaccgaggcgctcccaagCCAGCCAAGAGACATCGTCCCTCCAGAGTGTCCTATGTCTTCCCcaggggcctcctcccggtgggacatgcccggaacacctcccttaggaggcgtccgggaggcatctggaacagatgcccgagccacctcagcaggcctctctcgatgtggaggagcagcggttCTACTCTGAGATGACCGatgtcatggaattttcaactcagaattatgtgaagactgaaaaataaagagtccagcaaatttgtctttgtcttgcttttatttctccgcgcagagaacaaaatgatctggtttacacacagtgaagtctgtgagcaaagagataacagtgagctcacagattagaggttttataggcaaaagtatacattccaaggtcgctcaaattcatctcgaaccaattgaaatagtccaaagtcacgccacccatctgtgcttacagtgtctgattgttctccagtttatctcccgtacctagcacagatagggcatcctgtactcccatgaggttgttttaacatgggtttaacctctgtcacgcacacagtgtaggtttcccataactctaatattccaggtcactaatgtatgtttctgtgttcgtgcctagtaccgtgatgttacgaatatatatgtaatctatctttaagtaaagttagtttaatagtgaagttaattcaattcagtgttaaaagtgaacaataaacattaaatgtaatcaattagaataatttccattacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45381 True 840 lncRNA 0.45 2 23274505 23282812

Neighbor

gene id symbol gene type direction distance location
LOC122343131 NA coding upstream 44773 23226211 ~ 23229732 (+)
LOC122343008 LOC107575457 coding upstream 90959 23168155 ~ 23183546 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 525885 22739960 ~ 22748620 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 568011 22695800 ~ 22706494 (+)
LOC122343101 NA coding upstream 584826 22685702 ~ 22689679 (+)
LOC122343152 NA coding downstream 69115 23351927 ~ 23375871 (+)
LOC122342330 LOC101883771,LOC101885620,LOC108191338 coding downstream 330666 23613478 ~ 23614930 (+)
LOC122342945 LOC107563545 coding downstream 350986 23633798 ~ 24144571 (+)
LOC122343046 NA coding downstream 802147 24084959 ~ 24091352 (+)
kdm5a kdm5a,LOC107710764 coding downstream 811068 24093880 ~ 24112912 (+)
G30654 NA non-coding upstream 8203 23265866 ~ 23266302 (+)
G30653 NA non-coding upstream 9764 23264533 ~ 23264741 (+)
G30652 NA non-coding upstream 10039 23263597 ~ 23264466 (+)
LOC122343191 NA non-coding upstream 80643 23187316 ~ 23193862 (+)
G30628 NA non-coding upstream 131426 23066254 ~ 23143079 (+)
G30674 NA non-coding downstream 117244 23400056 ~ 23539037 (+)
G30676 NA non-coding downstream 133870 23416682 ~ 23419509 (+)
G30688 NA non-coding downstream 173463 23456275 ~ 23761495 (+)
G30732 NA non-coding downstream 438249 23721061 ~ 23787562 (+)
G30724 NA non-coding downstream 461513 23744325 ~ 23770705 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 106498 23163695 ~ 23168007 (+)
G30632 NA other upstream 114749 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 144316 23129106 ~ 23130189 (+)
LOC122342317 NA other upstream 494366 22777983 ~ 22780139 (+)
LOC122343019 LOC107705900 other upstream 591793 22661826 ~ 22682712 (+)
LOC122342976 usp15,LOC107685889 other downstream 834477 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 850238 24133050 ~ 24141446 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 1171458 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 1182642 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 1353540 24636352 ~ 24638654 (+)

Expression


Co-expression Network