G30688


Basic Information

Item Value
gene id G30688
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23456275 ~ 23761495 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45425
CTCGACGTgaaatatagaaattatattaagaAGCCGACTGTCTACCTTGTGGGAAATAATAACGGCCACTCGACGTGAAATATAGAAATGATATTAAGAAGCCGACTGTCTACCTTGTGCATGAAGCAATCCCTTGGGAATGATGTAAACACAGATATCAGACACCAGTCGTGACTAAAGTTCATGTAAAGAGCGTTCAAAAGATC

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45425 True 206 lncRNA 0.39 2 23456275 23761495

Neighbor

gene id symbol gene type direction distance location
LOC122343152 NA coding upstream 80404 23351927 ~ 23375871 (+)
LOC122343131 NA coding upstream 226543 23226211 ~ 23229732 (+)
LOC122343008 LOC107575457 coding upstream 272729 23168155 ~ 23183546 (+)
LOC122342997 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 707655 22739960 ~ 22748620 (+)
LOC122342996 LOC107572920,LOC107713771,LOC107575181,LOC107684374,LOC107677802 coding upstream 749781 22695800 ~ 22706494 (+)
LOC122343046 NA coding downstream 323464 24084959 ~ 24091352 (+)
kdm5a kdm5a,LOC107710764 coding downstream 332385 24093880 ~ 24112912 (+)
LOC122343029 LOC107717679,LOC107693607,LOC107575410 coding downstream 383237 24144732 ~ 24149459 (+)
LOC122343033 NA coding downstream 391261 24152756 ~ 24156499 (+)
LOC122342331 NA coding downstream 460582 24222077 ~ 24225829 (+)
G30676 NA non-coding upstream 36766 23416682 ~ 23419509 (+)
G30658 NA non-coding upstream 173463 23274505 ~ 23282812 (+)
G30654 NA non-coding upstream 189973 23265866 ~ 23266302 (+)
G30653 NA non-coding upstream 191534 23264533 ~ 23264741 (+)
G30652 NA non-coding upstream 191809 23263597 ~ 23264466 (+)
G30723 NA non-coding downstream 7679 23769174 ~ 24202672 (+)
G30743 LOC107685875,LOC107728228,LOC107569032,LOC107749047,LOC107574018,LOC107576424,LOC107705465,LOC107564371,LOC107671223,LOC107570416 non-coding downstream 26255 23787750 ~ 24211480 (+)
G30746 NA non-coding downstream 40061 23801556 ~ 23829584 (+)
G30748 NA non-coding downstream 145810 23907305 ~ 24030741 (+)
LOC122343177 NA non-coding downstream 206218 23967713 ~ 23976520 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 288268 23163695 ~ 23168007 (+)
G30632 NA other upstream 296519 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 326086 23129106 ~ 23130189 (+)
LOC122342317 NA other upstream 676136 22777983 ~ 22780139 (+)
LOC122343019 LOC107705900 other upstream 773563 22661826 ~ 22682712 (+)
LOC122342976 usp15,LOC107685889 other downstream 355794 24117289 ~ 24131487 (+)
LOC122342990 NA other downstream 371555 24133050 ~ 24141446 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 692775 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 703959 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 874857 24636352 ~ 24638654 (+)

Expression


Co-expression Network