G31020 (LOC107728228)


Basic Information

Item Value
gene id G31020
gene name LOC107728228
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23458727 ~ 23471751 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45858
aataagtcatttattatcatgatcgtttaataaattgtgtttatttgtaaaatgacCAGCTTCTCCTCGTAGCCTCAGCACTGCTCTAAACAGGAAGAACCTTgctgagaaaaagaaagtgaaagcaGATTATGTTTTACATGCGACGTTTACACTTGATCGTAAgaacttttcttcattttcaaaaactgatcattcatcttttatttgttcttgtGGGAAGATACATAAACTTCATGAGAAagcaaagacattttgagaagttgtctagaaactgaacgttttgatcaaagcaagtcttcagctgtggagcagaaagacacttccttattcatTTTCAGCTCAattcatcagaagagatcagaagcagagtccagctgtgtgtctatgaagagaGAGACCTCTGGGATTCAGTCTTTAGATTTTAAGAGAGGAGATACACGACCGGTTCTCAGtcatgAAGTCCTCACCACATTAAGATCAAATCTGCTGAAGAAgtttgagtgtctgtgtgagggaACAGCGACGCAGAGAAACCCAACACTGCTGAATgagatctacacagagctctacatcacagagaaaACTAAtaggaaaaatgtgtttatcaagTTGAAAAGCTtgcaatgtaattttaatataattatcctgtgtttgtttatatgaacCCTGGAATCGAAAGGGTAGAGATTTATACTGTATCATCTTAAAGCTGCATAAATAAAAGTTGATGTGTATCAAAAGAG

Function

NR:

description
PREDICTED: protein NLRC3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45858 True 746 lncRNA 0.36 3 23458727 23471751

Neighbor

gene id symbol gene type direction distance location
LOC122343073 NA coding downstream 199408 23256365 ~ 23259319 (-)
LOC122342325 LOC107741456 coding downstream 208113 23240075 ~ 23250614 (-)
LOC122342324 NA coding downstream 221647 23230042 ~ 23237080 (-)
LOC122342323 NA coding downstream 239554 23201470 ~ 23219173 (-)
LOC122342322 NA coding downstream 261112 23196547 ~ 23197615 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding upstream 254001 23725752 ~ 23727918 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding upstream 345098 23816849 ~ 23929534 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding upstream 735904 24207655 ~ 24220008 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding upstream 793598 24265349 ~ 24266607 (-)
LOC122342338 NA coding upstream 841091 24312842 ~ 24319112 (-)
LOC122343160 NA non-coding downstream 2911 23454277 ~ 23455816 (-)
G31012 NA non-coding downstream 61454 23391679 ~ 23397273 (-)
G30994 NA non-coding downstream 191869 23266625 ~ 23266858 (-)
G30993 NA non-coding downstream 192597 23265758 ~ 23266130 (-)
G30992 NA non-coding downstream 194511 23263732 ~ 23264216 (-)
G31024 NA non-coding upstream 2504 23474255 ~ 23474823 (-)
LOC122343190 NA non-coding upstream 22575 23494326 ~ 23496751 (-)
LOC122343181 NA non-coding upstream 202375 23674126 ~ 23675958 (-)
LOC122343201 NA non-coding upstream 256284 23728035 ~ 23731996 (-)
LOC122343194 NA non-coding upstream 261002 23732753 ~ 23743520 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 21712 23416891 ~ 23437015 (-)
G30450 NA other downstream 1213567 22128454 ~ 22245160 (-)
G30457 NA other downstream 1242257 22216035 ~ 22216470 (-)
LOC122342302 NA other downstream 1686328 21769124 ~ 21772399 (-)
G30372 NA other downstream 1718397 21737091 ~ 21740330 (-)
G31017 NA other upstream 6774 23478525 ~ 23546369 (-)
G31050 NA other upstream 273735 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 638473 24110224 ~ 24110673 (-)
G31134 NA other upstream 832345 24304096 ~ 24497596 (-)
G31120 NA other upstream 834750 24306501 ~ 24495178 (-)

Expression


Co-expression Network