G31088


Basic Information

Item Value
gene id G31088
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24126947 ~ 24127908 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45931
ATGTGTTTTTATCACTGAGAGCGAGTCTGATTCTGGGTCAGATGCATGTATCATGTACCAGAGGCGCAGCAGCAGTAGGTTGTAGAGCTTGTCCTCACTGATGGAGCGTGGCACACTCAGCAGGAAGGGCCGGCCGAACAGCGGCGTGCTGGTTTGGTTGAAGCCCGACTGCTTGTACTTCTCCCGCAGGTGGACGGGGATCAGAACGTGCTGTGTGTCCTCCAGCCGGCCGACGGACACCTCGACACGTAGATGTCGTCCCGCTCCATGATGCTGCTCAGGTTCTCGTTGCTGCTGAAGATCCGGTGGAACCTGTGGTTGTAGATGTCCGTCACGATCATCTAGACACGGCAGAGGAAGCTCAGTGAACGCACTGAAGATCTGCAGATGACAGACTCCTCACACAGACCTTACCTTCTTAGCCGAGACGCCCGACAGAATCGAAAGAGATGCACACAGATCAGAGATGCTGCCCACTTTAGGAACCGTCAGCTTCTGAGTGGGTTTAGCCAGCGGGTCCAGCCACACCAGATACACCTCCAGCGTCCGCTCCTTCTTCATTGGCAGAGGCAGCGTCAGGTAGCAgaaggggtcaaaggtcactgaGATCTTGGCACACACGGGACACACCAGAGTGGACTTGAAGAGGCCGTGGAAGATATCCACGATGATGGAGTCGTTCCTCTTGATGTGGTTCTCCCAGGCCTCCTCTGCCA

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU45931 True 716 lncRNA 0.56 3 24126947 24127908

Neighbor

gene id symbol gene type direction distance location
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 197413 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 399029 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 867628 23256365 ~ 23259319 (-)
LOC122342325 LOC107741456 coding downstream 876333 23240075 ~ 23250614 (-)
LOC122342324 NA coding downstream 889867 23230042 ~ 23237080 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding upstream 79747 24207655 ~ 24220008 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding upstream 137441 24265349 ~ 24266607 (-)
LOC122342338 NA coding upstream 184934 24312842 ~ 24319112 (-)
ckap4 NA coding upstream 349088 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 357454 24485362 ~ 24492499 (-)
G31090 NA non-coding downstream 1286 24122812 ~ 24125661 (-)
G31082 LOC107710764 non-coding downstream 26080 24100450 ~ 24100867 (-)
G31072 NA non-coding downstream 90196 24036349 ~ 24036751 (-)
G31063 NA non-coding downstream 116897 24003692 ~ 24010050 (-)
LOC122343167 NA non-coding upstream 84159 24212067 ~ 24215572 (-)
G31109 LOC107656690 non-coding upstream 121928 24249836 ~ 24426069 (-)
G31115 NA non-coding upstream 170872 24298780 ~ 24540339 (-)
G31127 NA non-coding upstream 177347 24305255 ~ 24312292 (-)
LOC122343180 NA non-coding upstream 185882 24313790 ~ 24314321 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 16274 24110224 ~ 24110673 (-)
G31050 NA other downstream 355179 23745486 ~ 23771768 (-)
G31017 NA other downstream 580578 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 689932 23416891 ~ 23437015 (-)
G30457 NA other downstream 1910477 22216035 ~ 22216470 (-)
G31134 NA other upstream 176188 24304096 ~ 24497596 (-)
G31120 NA other upstream 178593 24306501 ~ 24495178 (-)
LOC122342340 NA other upstream 196062 24323970 ~ 24327263 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 626148 24754056 ~ 24760786 (-)
G31314 NA other upstream 1431132 25559040 ~ 25561198 (-)

Expression


Co-expression Network